Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2940 ATGTGGCCAGCCCATATCCAGAATGTGTTACCTATATTTATAACTGAAACCATTTTCTCATATTCTCTCTGTCTTCTTTCATCTCTACACACACACACTACTTCATCATCATCATCATCATCATCATCATTTAATCATTTTTCAATCTCAGTTTCTGACATGTCCGTTGAGCTTGAGCTCGAATCTGAATCAACCTCACCAACCGCTCATCTCCAACAGAGATCAACAAGAGCCTTATGTTTTCCAACCTGCTTCGCTTCACGACGCAGTTCCATTTGGTGGGAGCGCGTCCGCTCCGCCTCCTTTTCTCAATCCCATCCCACCACCACCGCAGATCGATGGTGGTCTCGCGGTCTCAAAGCCTTAAAGAAACTCCGAGACTGGTCAGAAATCGTCGCCGGTCCAAGATGGAAAACCTTCATTCGGAAATTCAACCACCATCGTTCCTCCAGACGAATGGCCAATTCCAAGTACCAATACGATCCGTCGAGTTACGCCTTGAACTTCGATGAAGGTCAGAACGAGTTTAGCCACGACGAAGGGTTTCATAATTTCTCTACGCGTTACGCCGCCGTTAATGTTAAGTCTGTTGCGCCGGAACCGAATTGTGAAATCGGAGTTTTGGTTTGA 630 0.4619 MWPAHIQNVLPIFITETIFSYSLCLLSSLHTHTTSSSSSSSSSFNHFSISVSDMSVELELESESTSPTAHLQQRSTRALCFPTCFASRRSSIWWERVRSASFSQSHPTTTADRWWSRGLKALKKLRDWSEIVAGPRWKTFIRKFNHHRSSRRMANSKYQYDPSSYALNFDEGQNEFSHDEGFHNFSTRYAAVNVKSVAPEPNCEIGVLV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2940 209 PANTHER - 54 199 - -
Tpr5g2940 209 PANTHER STRESS INDUCED PROTEIN-RELATED 54 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2940 Tpr-Chr5 52418177 52419090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2940 - - pvu:PHAVU_003G198600g 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2940 5 52418177 52419090 Tpr2g6020 2 72893753 72894403 ECH
Tpr5g2940 5 52418177 52419090 Tpr5g2940 5 52418177 52419090 ECH