Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2939 ATGCGATCCACTCCTACCTTCACCATCTTCGCCATCTTCTTCATCACAATCCTTCCCCATGGACACTCATCCTCACCATTTTCTACTGCCCTCGAAACCCTCCAGAAACAATTAGGGTACAACTTCACGAGCGTAAGTCTTCTTCGTCGTGCCATGACTCACGCTTCCTTCTCCCAAGAGAACAACAAAGCTTTCAGCATTGTTGGTGCTACTATCATAGAATCAACGGTTTCTTTCAATTTGATTTCAAAATACATTGATATTTCTGCCAAAGAGTTGAACCATAAATTATCACTAATCTCTAATGTGGACTCTTCATGTGCTGTTGATGGAATCAATTTGGGTTTACATAAGGTTGTTCGTGTCTCGTCTAAGACGAATAGTTCTTCCACTGCTGTTGTTTGTGGTGCTTTTCGATCAATCTTTGCTGCTATTGCTATTGATACTGGTAATCCATGTAATGCTGGTAATTTTTTCTTGAATATTCATGGTGGTCTTGATCTAGGGGTTTACGCCGCCATGTGA 525 0.4114 MRSTPTFTIFAIFFITILPHGHSSSPFSTALETLQKQLGYNFTSVSLLRRAMTHASFSQENNKAFSIVGATIIESTVSFNLISKYIDISAKELNHKLSLISNVDSSCAVDGINLGLHKVVRVSSKTNSSSTAVVCGAFRSIFAAIAIDTGNPCNAGNFFLNIHGGLDLGVYAAM* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2939 174 Gene3D Ribonuclease III domain 29 164 IPR036389 GO:0004525|GO:0006396
Tpr5g2939 174 ProSiteProfiles Ribonuclease III family domain profile. 31 150 IPR000999 GO:0004525|GO:0006396
Tpr5g2939 174 SUPERFAMILY RNase III domain-like 25 151 IPR036389 GO:0004525|GO:0006396
Tpr5g2939 174 SMART riboneu5 46 168 IPR000999 GO:0004525|GO:0006396
Tpr5g2939 174 Pfam Ribonuclease-III-like 46 151 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2939 - - gmx:100527745 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2939 5 52400262 52401333 Tpr5g2939 5 52400262 52401333 ECH