Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2933 ATGCAGTGTTTTTTATTTGCAGGAAATGTCATCTCATTTTGTTTGTTCATGTCTCCGGTACCTACATTTATAAAAATATGGAAAGCAAAATCAGTGCAAGATTTCAAATCAGATCCATATGTGGTAACAATACTCAATTGTGCAATGTGGTCATTCTATGGAATGCCCTTTGTGAGTAAATATAACATACTTGTCCTCACAATTAATGGCTTTGGTTTCTTCCTTGAGATTTTCTACACTTTCATCTTCTTCATATACTCGAATGGGAGTAAGCGTAAGAAGATTTTGTTGGCCCTTCTAGCTGAAGTTGTCTTCTTTGTGTTAGTGGTATTTATTGTCATGTATTTCATTAACTCAATGAAAGACAGAGGGTTCGTTGTTGGATCTATATGTATAGTCTTCAACATTCTTATGTACTTTTCACCCTTGACTGTCATGCGTCAAGTAATTAGAACGAAGAGCGTGAAGTACATGCCATTCTTGCTCTCACTCGCCAACTTCCTCAACGGAGTTGTCTGGACGACTTATGCACTCCTTAAATGGGATCCGTTCGTAGTGATTCCAAATAGTTTGGGAGCACTTTCTGGATTGGTTCAGCTCATCCTATATGCTGTTTACTACAGAACAACAAATTGGAACGATGATGCCCCACCTAGTATTAACATGGTATGA 672 0.378 MQCFLFAGNVISFCLFMSPVPTFIKIWKAKSVQDFKSDPYVVTILNCAMWSFYGMPFVSKYNILVLTINGFGFFLEIFYTFIFFIYSNGSKRKKILLALLAEVVFFVLVVFIVMYFINSMKDRGFVVGSICIVFNILMYFSPLTVMRQVIRTKSVKYMPFLLSLANFLNGVVWTTYALLKWDPFVVIPNSLGALSGLVQLILYAVYYRTTNWNDDAPPSINMV* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2933 223 Pfam Sugar efflux transporter for intercellular exchange 5 88 IPR004316 GO:0016021
Tpr5g2933 223 Pfam Sugar efflux transporter for intercellular exchange 126 209 IPR004316 GO:0016021
Tpr5g2933 223 Gene3D - 124 211 - -
Tpr5g2933 223 Gene3D - 4 93 - -
Tpr5g2933 223 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET5 7 218 - -
Tpr5g2933 223 PANTHER RAG1-ACTIVATING PROTEIN 1 7 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2933 Tpr-Chr5 52369316 52371887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2933 8 187 Miscellaneous Gene Families AT5G62850 57.778 4.27e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2933 K15382 - gmx:100810948 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2933 5 52369316 52371887 Tpr5g2933 5 52369316 52371887 ECH