Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2926 ATGGCAACGCAATCACCACCACCACCGCCTCCCGCCGACGAAAACCAAGGTGCTGAAATTATCCAACCAACCAACGTGGATCAGCAAAATGCCGGAGATGAGTCTGTTAAACCCAGTTCAACTACATCAGTCTTTGTCAACTCTGAACCACCACGGGAAGATCAAGTTCAGAATGCTGTGAAATTTCTATCACACCCAAAAGTTAAAGGTTCACCCGTTATGTACAGGCGGTCATTTTTGGAGAAGAAGGGCCTTACGAAGGAGGAGATTGATGAAGCCTTTCGGCGTGTGCCTGATTCAGCTCCAACTGTACAGACAGGTGGTGTAAATCAAGATGGGCAATTAAAATCATCATCAAATATTCAGCAACAACCCCAACAGCAAACTTTGCAGCCAGGTTTACCTGCTTCTACTGGTGTTAATACTGCACCAGGAATCTTATCACGATCCAGATTTCACTGGTCACATGCCCTTATTCTAGTTGGAGTCCTGACTGCTTCAGGTGCTGGAACAGTTATAATAATTAAGAATTCCCTTCTTCCTCGGTTAAAGTCTTGGATACGAAAGGTTGTCTTAGACGAAGATGATGAACAACTAAAGAAAACTATTAACAAACCAACTTTGGCTGAAGAGACTGCTCAAGCTGCAAAATCAGCAGCAGCTGCAGCTGCAGATGTGGCAAAAGCAAGCCAAGAAATGCTGGCTTCAAAGGGTGAAGAGAGGAAATACTTTGTGGAAGTTGTCAGTCTTTTAGATAAGCAAATACAAGAAATGAAGTTAATGACAAGTGCAATAAGAAGATTGGAAGGGCAAGAAGATCTCCGAGTCAGTCAAACAAGTTCGAAGCGACTGGTTGCGAATGGCAAGGCGGACTATGACATGCGTTCAGTGAGATCGTTATCCCCACCTGCATCTGTTGAACCATCAGGTCCTCCTCATCCAAAGTCATATATGGAGATAATGGCCATGGTCCAAAGAGGGGAGAAGCCTTCTAATATCAGACCTTGGGAGATTGGGCAGGTTCAAAACACGTCTAGCCAAGTGTTTCATCCTCAAGTAAATGGTGAAGAATCGTACGTCAAGGTCCACGATACCACTCAATCAAATGGGGATGATCCATTGCCCTGGTGGCAGAAGAAGAATGTCAGAATCAGGGAGATTGATGAAGTTGAGTATAATGTAGCACCTAATGGTGCTGCATCCACTCAGCAGCCGCTACAACGTGTGTGGGTTCCTCCTCAACCTCCACCAATAGCTATGGCTGGGGCTGCAGAAGCAATCAGGCGCCCAAAACAGGCTGTCCAAAAGGAACAGGTGTCAGATAATCAGTCAGTAGCTCAATCTTCAGATATCTCTAATGGGGCACACGAGATCCCAATACCATCGGAATCTGAAGGTGCTGTAGAGGGAACCAACGTCAGCTCTAGTGAGATACAAGTCGTACAAGAAGACAGTGAAACCAAATCTGAAGAGCAATGA 1479 0.4537 MATQSPPPPPPADENQGAEIIQPTNVDQQNAGDESVKPSSTTSVFVNSEPPREDQVQNAVKFLSHPKVKGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTGGVNQDGQLKSSSNIQQQPQQQTLQPGLPASTGVNTAPGILSRSRFHWSHALILVGVLTASGAGTVIIIKNSLLPRLKSWIRKVVLDEDDEQLKKTINKPTLAEETAQAAKSAAAAAADVAKASQEMLASKGEERKYFVEVVSLLDKQIQEMKLMTSAIRRLEGQEDLRVSQTSSKRLVANGKADYDMRSVRSLSPPASVEPSGPPHPKSYMEIMAMVQRGEKPSNIRPWEIGQVQNTSSQVFHPQVNGEESYVKVHDTTQSNGDDPLPWWQKKNVRIREIDEVEYNVAPNGAASTQQPLQRVWVPPQPPPIAMAGAAEAIRRPKQAVQKEQVSDNQSVAQSSDISNGAHEIPIPSESEGAVEGTNVSSSEIQVVQEDSETKSEEQ* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2926 492 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 334 482 IPR025655 GO:0005515|GO:0005778|GO:0016560
Tpr5g2926 492 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 9 334 IPR025655 GO:0005515|GO:0005778|GO:0016560
Tpr5g2926 492 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 9 334 - -
Tpr5g2926 492 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 334 482 - -
Tpr5g2926 492 MobiDBLite consensus disorder prediction 113 137 - -
Tpr5g2926 492 Pfam Pex14 N-terminal domain 52 96 IPR006785 -
Tpr5g2926 492 MobiDBLite consensus disorder prediction 1 53 - -
Tpr5g2926 492 Coils Coil 251 271 - -
Tpr5g2926 492 MobiDBLite consensus disorder prediction 467 482 - -
Tpr5g2926 492 MobiDBLite consensus disorder prediction 18 53 - -
Tpr5g2926 492 Gene3D - 41 104 IPR036388 -
Tpr5g2926 492 MobiDBLite consensus disorder prediction 436 455 - -
Tpr5g2926 492 MobiDBLite consensus disorder prediction 430 492 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2926 K13343 - gmx:100786361 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2926 5 52308307 52315782 Tpr5g2926 5 52308307 52315782 PCT