Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2923 ATGGATCAACCAATTCACGATTTACCGGAAAGATCTTCATCGGAGTACGATTCCGCCGGCGATGATGAATCGGTGGTTTCCGATTGCGAGAGCGTTACTTCAGGCGGTCACGTTTCAGAAAAAGTTGTTAGGAAGACGGATGGTGTTGATTTCAACTTTATTCGTAGCAGATTCGTTTGCGGTATGAGTACGCAAGGATTGAAAGTTGAAGCAGTATCGATTCGAAGGAATTCTTGTTCAACTGTAATGGCACAAGCTAGGGTTCAATCGTTTCAGATCTTCGCACGTGCGGTTGCTAAATTGCGCCATGGGAATGCTAATGTGAAACACGCTTGGTATGGTGCTTCTAGTAAGGAAGAAATTGTTGAAATAATTCAACACGGTTTCGGTCATGCTCATGTCAATGGCTTACGTCTTTCTCCGAATGATTCTCCTCTCCAAAGTGTGAAAAACTCTGTTGTTGATAAAGACGGTTTTAGGCATTTGTTATTGTGCCGTGTGATCCTAGGAAGGATGGAGGTTGTGGCGGAAGGTTCTGATCAACGTCGTCCGAGTTCCGAAGAGTATGATTCTGGGGTGGATGTGGATAGTTTGTCATCTCCCAAGGAGTACATTGTTTGGAGTAACAAGATCAACACACATGTGTTACCTGAATATGTTTTGAGTTTCAAACTTGCTTCCGACAGAGGACATGAGAAGGTTGGAGTTGAAGGGCAACTTATGAAACCGTCTTCGCCTTGGATGCCATTCCCGGCTCTAATTTCGGTGCTTTCCAAGATTTTGCCTCAATCTGAGATTGCTTTCATTACCAAGTTTCACAAAGAGTATAGGGATAAGAAGATTTCACGACAGGAATTGATACAAAAAGTTAGAGTAGTTGCGGGAGACAAATTGCTGGTTTCTGTTATCAGAGCTTTCAGAGCAAAGAAAATGCCTGCAAGCTTTAAGCAAACCGGACAGCCAGCAACGTGGATGGCATAA 981 0.4353 MDQPIHDLPERSSSEYDSAGDDESVVSDCESVTSGGHVSEKVVRKTDGVDFNFIRSRFVCGMSTQGLKVEAVSIRRNSCSTVMAQARVQSFQIFARAVAKLRHGNANVKHAWYGASSKEEIVEIIQHGFGHAHVNGLRLSPNDSPLQSVKNSVVDKDGFRHLLLCRVILGRMEVVAEGSDQRRPSSEEYDSGVDVDSLSSPKEYIVWSNKINTHVLPEYVLSFKLASDRGHEKVGVEGQLMKPSSPWMPFPALISVLSKILPQSEIAFITKFHKEYRDKKISRQELIQKVRVVAGDKLLVSVIRAFRAKKMPASFKQTGQPATWMA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2923 326 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 17 316 - -
Tpr5g2923 326 Gene3D - 45 225 - -
Tpr5g2923 326 ProSiteProfiles PARP catalytic domain profile. 28 245 IPR012317 GO:0003950
Tpr5g2923 326 ProSiteProfiles RST domain profile. 241 312 IPR022003 -
Tpr5g2923 326 SUPERFAMILY ADP-ribosylation 84 224 - -
Tpr5g2923 326 MobiDBLite consensus disorder prediction 1 22 - -
Tpr5g2923 326 MobiDBLite consensus disorder prediction 1 18 - -
Tpr5g2923 326 Pfam RCD1-SRO-TAF4 (RST) plant domain 242 307 IPR022003 -
Tpr5g2923 326 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 17 316 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2923 Tpr-Chr5 52289359 52292557 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2923 - - gmx:100784311 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2923 5 52289359 52292557 Tpr5g2923 5 52289359 52292557 PCT