Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2920 ATGAGAGAAAATATAGTGTTGTTTGGTGATTCAATAACAGAGCAATCTTTCCGAGAAAATGGTTGGGGTGCTTCACTCGCCAATGCATACTCTCGCAAGGCTGATGTACTTATTCGTGGCTATGGTGGTTACAACACTAGATGGGCTTTGTTCTTACTCCATCATCTCTTCCCTTTGGAATCAAGTAAACAACCTCTTGCTACCACTATTTTCTTTGGTGCTAATGATGCGGCTTTGTCTGGAAGAACTAGTGAAAGACAACATGTACCTATTCCAGAATATAAACAAAATCTCCAAAAAATTGTGCTCCACTTAAAGTCATGCTCACCAACTATGCTTATTGTGCTTATTACTCCACCTCCAGTTTGTGAGGAAGGGCGTCAAGCATATGCAATATCCTTATACGGTAAGAATGCTAGAGAATTACCGGAAAGAACAAATGAAGTTACTGGTCAATATGCAAAAGCATGTGTTGAGATAGCTAAGGAATTGGGTGTGGCATATATCAATCTATGGTCCAAAATGCAAGAAACAGATGGCTGGCAAAAGAAATTTCTGTGGGATGGGTTGCACCTGACACCGGATGGAAATGCAGTAGTCTATCAAGAAGTGATCAAGGTGTTCAACGACGCAGGACTTTCTGCTGATAAAATGCCGTATGATTTCCCTCACCACTCAAAAGTTGATGACAAAAATCCTGAGAGCTCTTTCCAGCAGAATGTTTGTGAAGCCTCATTATAG 741 0.4076 MRENIVLFGDSITEQSFRENGWGASLANAYSRKADVLIRGYGGYNTRWALFLLHHLFPLESSKQPLATTIFFGANDAALSGRTSERQHVPIPEYKQNLQKIVLHLKSCSPTMLIVLITPPPVCEEGRQAYAISLYGKNARELPERTNEVTGQYAKACVEIAKELGVAYINLWSKMQETDGWQKKFLWDGLHLTPDGNAVVYQEVIKVFNDAGLSADKMPYDFPHHSKVDDKNPESSFQQNVCEASL* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2920 246 Pfam GDSL-like Lipase/Acylhydrolase family 7 198 IPR013830 -
Tpr5g2920 246 SUPERFAMILY SGNH hydrolase 4 208 - -
Tpr5g2920 246 CDD Isoamyl_acetate_hydrolase_like 5 207 - -
Tpr5g2920 246 Gene3D SGNH hydrolase 2 237 IPR036514 -
Tpr5g2920 246 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 1 239 - -
Tpr5g2920 246 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 239 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2920 Tpr-Chr5 52270305 52273224 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2920 K23978 - gmx:100782709 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2920 5 52270305 52273224 Tpr5g2920 5 52270305 52273224 ECH