Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2917 ATGCAATCTTTATCGTTAAGTAGTAGCAAGAGTTTGGCAGGTTTACGATTGGTAGGTCAGGATGCGAGGCTGAAGAGAAAGAGTAGCGTCGTCGTGGTTGTGGTCGCATGTGGCAGCAAAGACACTCCTCCTCTAACTCCAACTTCAACCTCATTTCTCTCCAGGACTCAAACTTACGCTCTTTTGAAACAACAAATGGAAGTTGCTGCTAAATCCGAGGATTACAAGGAAGCTGCTAGAATTCGTGATTCGCTTAAATTGTTTGAAGAAGAAGAGCCTGTTTTGCGTTTAAGGAGGTTAATCAAAGAAGCAATTGCTGATCAGAGGTTCCAGGATGCAGCTACTTATCGTGATGAGCTAAAAAAAATTGCTCCACACTCTCTTTTAAAATGTTCCAGTGATGCTACAACACAGGGAGTCAGGGTTCAAGTCAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAAGGACTCTACTTTTTTGCATATAGAATAAGAATTACCAATAATTCAGATGACACCGTTCAACTTCTTAGAAGGCATTGGATTATAACCGACGCTAATGGGAGAACAGAAAATGTATGGGGAATCGGGGTTGTTGGTGAACAGCCTGTACTTCTTCCCAGGACTAGTTTTGAGTACTCTTCGGCATGCCCATTAAGCACACCAAATGGTATAATGGAAGGTGAATTTGAGATGATCCATGTTGATAAAGTAGGTTCGCGTTCATTTAATGCTACCATTGCCCCGTTTTCTCTCGCTCTGCTAGGAGATGATGACTGCAATACTATTTGA 798 0.4211 MQSLSLSSSKSLAGLRLVGQDARLKRKSSVVVVVVACGSKDTPPLTPTSTSFLSRTQTYALLKQQMEVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLIKEAIADQRFQDAATYRDELKKIAPHSLLKCSSDATTQGVRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDDTVQLLRRHWIITDANGRTENVWGIGVVGEQPVLLPRTSFEYSSACPLSTPNGIMEGEFEMIHVDKVGSRSFNATIAPFSLALLGDDDCNTI* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2917 265 Gene3D ApaG domain 130 260 IPR036767 -
Tpr5g2917 265 ProSiteProfiles ApaG domain profile. 134 261 IPR007474 -
Tpr5g2917 265 ProSiteProfiles UVR domain profile. 91 126 IPR001943 GO:0005515
Tpr5g2917 265 ProSiteProfiles UVR domain profile. 56 91 IPR001943 GO:0005515
Tpr5g2917 265 Pfam UvrB/uvrC motif 62 90 IPR001943 GO:0005515
Tpr5g2917 265 SUPERFAMILY ApaG-like 136 255 IPR036767 -
Tpr5g2917 265 Pfam ApaG domain 152 235 IPR007474 -
Tpr5g2917 265 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 57 89 IPR036876 -
Tpr5g2917 265 PANTHER OS05G0170800 PROTEIN 41 261 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2917 - K06195 lja:Lj4g3v1476200.1 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2917 5 52251822 52255880 Tpr5g2917 5 52251822 52255880 ECH
Tpr5g2917 5 52251822 52255880 Tpr5g2917 5 52251822 52255880 PCT