Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2908 ATGGATGTTATGGAGGTTGTGAACTTATGTAGTGATGATGAAGGGGAGGACGGCATTGTAACTGTTAGTAGTGTAAACCCGCATCAGACCAACAAAGAATTATCAACCAAAAATCAGAAGTATCAAAGTCATTCTACTAATCAAGTTTCTGAAGAAACTATACTATCCAGTGGTGAAAGTTTGTGCCGTAGTTATACGGGTACATCCGGACTTTCTAGTCCACAACCACTTTCTGCAACACCCGATTGTAGGAAGTTTTGGAAAGCAGGAAACTATGATAATGGGCTTGGTTCGAAAGTCGGCTCCCAACATGCAAAAAACTATCTTCATGTCCACCCTTTGTTCCTTCACTCAAATGCCACTTCACATAAGTGGGTATTTGGTGCCATAGCCGAGCTTCTTGATAACGCATTTGATGAGATCCAAAATGGGGCTACTTCTGTTATGGTGGATAAGATTTTAAATCCGAAGGATGGAAGTCCAGCATTGTTGATTCAAGACAATGGTAATGGAATGGATCCAGAAGCAATGCGGCGTTGCATGAGCTTTGGATTTTCGGATAAGATGTCAAATTTTGCAATTGGACAGTATGGAAATGGTTTCAAGACTGGTAGTATGAGACTGGGCGCAGATGCAATTGTCTTCAGCTGCCACATGAATGATATGGCATGTACAAAAAGCATTGGACTTCTATCTTATACATTCTTGACGCGAGCACAGCTTGACAGAATTGTAGTGCCCATGGTAAGTTATAAGTGTAATACATCAACAGGATACCTGGAAAAACTAAATCACCAAGAGCATTTTACGTCTAATATGTCCTTGCTGCTGGACTGGTCTCCATTTCTATCAGAAGCAGAAATTGTGAAACAATTTGACGACATTGAAAATCATCACGGTACGAAAATTATTGTCTTCAATTTATGGTTCAATGATGATGGGAATTTAGAACTAGACTTTGATACTGATCCTGAGGATATTCTTATTTCTGGAGATAGGAAGAAGATTAGTACGCTTCCAGCCTGGAAGAGAGTAAATGAGCAACATATAGCTAACCGGCTTCAATATTCTTTACGTGATTACTTGTCTATATTGTACTTGCCGGTACCAAAAAGTTTTAGAATCATATTGCGAGGGAAAGCTGTGAAGCTTCGTAACTTAGCAGATGATCTCAAAGATACTGAGTTCATCGTGTATAGACCACAAAATGGTGGTTCCGAAGAGGGATTATTTGTGACCACAATTGGATTTGTTAAAGAAGCTCCTGAAGTCAGCATCCACGGCTTCAATGTCTATAACAAAAATCGGCTGATATTGCCATTTTGGCCGGTTGTGAAAGATTTAATCAATAGGGGTAGAGGAGTTGTTGGCATATTGCAAGCAGATGATGTTCAGCCAACTCATAATAAGCAAGATTTTGAGAAGACTTCCCTGTTTCAAAAGCTTGAAATGCGCTTGAAGGATATGACATGGGAATACTGGGATTTACATTGTCATAAAATTGGGTATCAGCAAAAGAAGCGTAGAAATCTAGCTGGCCCACTTAATTCATCAATGAAGAAATCACTTGTTAAAGAAAACCCAGTTGCATTGGATAACTGTTCTTCACCTGTGCCAGTATCTAACACACAAGGCGGATCTGAACAAACATGTCTTACCAAGAGGAAGACACGTGGATTTATAGATCATCGTGAGATGAAAAGGCAAGCAGCGGAAACAAATGTAACAGGTCTTTGTTGCAATCAGAAAGTACAGACTACCGCATCACCTGCAGACCAGACAGTTGACCAACAAACTGTGAACTTACTGGAACAGAAGAAGAAACTCATAGCTAAATGTTCTGCATTTGAAAAGGCAGAGAAGGAACTTAATCTTAAGGTGACAGAGCTTAGGAATAAACTTGAAGAAGCAAACCTCAAGTATAACAGACTTCTGGCCGAAGCAGAAGAATTAGACTGTCTGGCTGAACTATAA 1974 0.3982 MDVMEVVNLCSDDEGEDGIVTVSSVNPHQTNKELSTKNQKYQSHSTNQVSEETILSSGESLCRSYTGTSGLSSPQPLSATPDCRKFWKAGNYDNGLGSKVGSQHAKNYLHVHPLFLHSNATSHKWVFGAIAELLDNAFDEIQNGATSVMVDKILNPKDGSPALLIQDNGNGMDPEAMRRCMSFGFSDKMSNFAIGQYGNGFKTGSMRLGADAIVFSCHMNDMACTKSIGLLSYTFLTRAQLDRIVVPMVSYKCNTSTGYLEKLNHQEHFTSNMSLLLDWSPFLSEAEIVKQFDDIENHHGTKIIVFNLWFNDDGNLELDFDTDPEDILISGDRKKISTLPAWKRVNEQHIANRLQYSLRDYLSILYLPVPKSFRIILRGKAVKLRNLADDLKDTEFIVYRPQNGGSEEGLFVTTIGFVKEAPEVSIHGFNVYNKNRLILPFWPVVKDLINRGRGVVGILQADDVQPTHNKQDFEKTSLFQKLEMRLKDMTWEYWDLHCHKIGYQQKKRRNLAGPLNSSMKKSLVKENPVALDNCSSPVPVSNTQGGSEQTCLTKRKTRGFIDHREMKRQAAETNVTGLCCNQKVQTTASPADQTVDQQTVNLLEQKKKLIAKCSAFEKAEKELNLKVTELRNKLEEANLKYNRLLAEAEELDCLAEL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2908 657 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 127 226 - -
Tpr5g2908 657 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 4 648 IPR045261 GO:0016887
Tpr5g2908 657 PANTHER PROTEIN MICRORCHIDIA 6 4 648 - -
Tpr5g2908 657 Coils Coil 613 654 - -
Tpr5g2908 657 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 125 329 IPR036890 -
Tpr5g2908 657 Pfam Morc6 ribosomal protein S5 domain 2-like 356 494 IPR041006 -
Tpr5g2908 657 Gene3D - 112 317 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2908 Tpr-Chr5 52193600 52204604 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2908 - - mtr:MTR_4g105530 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2908 5 52193600 52204604 Tpr5g2908 5 52193600 52204604 ECH