Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2907 ATGAAACACATATTTTCCTATTGGTTATGCCATTTTCTTCTGTTATTGGCCACACTTGATACTTCTTTTGTTGCAACACTTAGTAATGATGCTGATGCAACAGACACTAACTTGCTTCTAAGGGTTAAATCAGAACTGGTTGATCCATTAGGAGCCATGAAAAACTGGTCTCCAACAACTCATGTTTGCAAATGGAATGGAATAACATGCGATGTTAATCAGAAACATGTTATAGGTTTGAATCTTTCTGGTTCAGGAATATCAGGTTCCATTTCAGTTGAGTTAAGTAATCTCATTTCTCTTCAAACACTTGATTTGTCTTCAAATTCACTTAATGGTTCCATACCTTTAGAGCTAGGTAGCCTTAAAAATCTAAGGACACTCCAACTATACTCAAATTACCTCTCTGGTAACATTCCTAAAGAGATTGGTAATTTGAAGAAGTTGCAAGTTCTTAGAATAGGTGATAACTTTTTGACAGGCGGTATTCCACCTAGCATCATTAACTTGAGTGAGTTGAATGTGTTAGGTTTAGGTTACTGTCATTTAAATGGAACCATACCAGTTGGAATTGGTAATTTGAAAAATCTAGTTTCACTTGATTTTCAAATGAATAGTCTTAGTGGCCTTATACCTAAAGAGATAAAAGGCTGTGAAATGCTTCAAAACTTTGCAGGATCAAATAACATGTTTGAAGGAGAGATTCCTTCATCTATAGGTTCCCTTAAAGCATTGAGAATTCTTAATCTAGCAAATAACAGTCTTTCTGGACCGATTCCTATATCGTTGAGTTATCTTTCTAACTTGACATACCTTAATTTGCTTGGAAATAAACTAAATGGTGAAATTCCATATGAGCTTAATAGTTTGATCCAATTGCAGAAGCTAGACTTGTCTAGCAACAACTTTTCTGGATCAATACTCGTCCTTAATACCAAACTGAAGAGTCTCGAAACTTTAGTTTTGTCTGATAATTTTTTGACAGGTAAGATTCCAAGTAGTTTCTGTTTCAAAGGTTCAAAGCTTAATCAAATTTTCTTGGCTAATAATATTTTCTCTGGAAAATTTCCCTTGGAGTTACTCAACTGTTCTTCAATACAACAGTTGGATCTTTCTGGTAATAGCTTTGAAGGTGGAATTCCATCTAGCATAGATAAACTGCAGAACCTCACCGATCTTGTACTCAACAACAACACCTTTGTTGGATCACTGCCTCGTGAAATCGGAAATATTAGTACTTTGGAAGGTCTTTTCCTATTTGGTAATTTTTTAACAGGTGAAATCCCAGTGGAGATTGGAAGGCTGAAGAGATTGAACACTATTTATCTCTATGATAATCAAATGTCTGGATTCATACCAAGAGAGTTAACAAATTGCACAAGCTTAAGCGAAATTGATTTCTTTGGAAACCATTTTACAGGTCACATTCCTGAGACTGTAGGGAAGCTGAAAAACTTGGTTCTTCTTCATTTGAGGCAAAATGATTTGTCTGGTTCAATCCCTCCAAGTTTAGGGTACTGCAAAAGTCTTCAAGTATTGGCCTTAGCAGATAATAAACTTTCAGGTTCTATTCCACATACATTTAGTTACCTTTCAGAACTTTTTAAGATTACTCTTTACAATAACTCCTTTGAAGGACCTATCCCTCATTCACTTTCTTCTCTCAAAAACCTCAAAATCATAAATTTTTCACACAACAAATTCAGTGGAAGTTTCTTTCCTTTAACTTCTTCAAATTCTTTGACTCTTCTTGACTTGACTAACAACAGCTTCTCAGGTCCTATCCCTTCTAATCTAGCTAATTCAGTAAACCTCCACCGTCTCCGGCTCGGATACAATAACCTCACTGGAACTATTCCTTCTGAGTTTGGCCAGCTTAATGATCTAAACTTTTTTGATTTATCATTTAACAGTTTAACAGGAGAAATACCACCTCAACTCTCAAACTCGCGCAAAATAGAACACATTTTGCTGAGTAATAACAGATTGAGTGGCAAGATACCTAATTGGTTAGGAATCTTCCAACAACTTGGTGAGTTGGATCTCTCATACAATAACTTCACTGGCAAGTTACCTTCTGAAATTGGTAACTGTTCAAACTTACTCAAGCTTTGTCTCCATAACAACAATTTGTCTGGTGAAATTCCTCAAGAGATTGGAAATCTCACTTCTCTTAATGTCTTCAACATTCAAAGCAATAGTCTCAACGGCCACATTCCTTCAACTATTCAGCAATGCAAGAAGCTCTATGAGCTAAGGCTCTCACAAAATTTTCTGACAGGTACTATACCATTTGAGCTAGGAGAGCTTGATGAGTTACAAGTGATATTAGATTTGAGCAAAAATCTCTTCACTGGTGAGATTCCATCATCTTTAGGTAACCTAATGAAGCTAGAAAGACTCAACTTATCTTTCAATCAACTTCAAGGAAAAGTTCCTACTTCACTTGGTAAACTTACAAGCCTGCATGTGTTGAATCTCTCAAATAACCATCTTGAAGGCCAAATTCCTTCAACTTTTTCAGGGTTTCCAAGAAGCTCTTTCTTGAACAATAACCGGTTATGCGGCTCGCCGTTAGTATCTTGCACAGGATCAACATCACAGGGGAAAATGCAGCTATCAAACACACAAGTTGCAGTTATAATTGTGGCTATTGTGTTTACTTCAACTGTGATATGCTTAGTTATGTTGTATATAATGCTTAGAATTTGGTGTAACTGGAGAAAAGTTTCAATATCAAATGATGCAGATGGAGGTAATGTTGCTATGAAGAAAGAGGAAAGTAGATGGGGTTGTAATGATCAGAAGACAAGGAATGGAGAGTATTGGAATATGAATTCATTTGGATTCATTCCTTCACCAGATAAGAATAATTCAGTTACAACAACTTGTTTTTTTAATATCAAAATGGAAGCCATGGAAAATGCAAATATATAA 2937 0.3568 MKHIFSYWLCHFLLLLATLDTSFVATLSNDADATDTNLLLRVKSELVDPLGAMKNWSPTTHVCKWNGITCDVNQKHVIGLNLSGSGISGSISVELSNLISLQTLDLSSNSLNGSIPLELGSLKNLRTLQLYSNYLSGNIPKEIGNLKKLQVLRIGDNFLTGGIPPSIINLSELNVLGLGYCHLNGTIPVGIGNLKNLVSLDFQMNSLSGLIPKEIKGCEMLQNFAGSNNMFEGEIPSSIGSLKALRILNLANNSLSGPIPISLSYLSNLTYLNLLGNKLNGEIPYELNSLIQLQKLDLSSNNFSGSILVLNTKLKSLETLVLSDNFLTGKIPSSFCFKGSKLNQIFLANNIFSGKFPLELLNCSSIQQLDLSGNSFEGGIPSSIDKLQNLTDLVLNNNTFVGSLPREIGNISTLEGLFLFGNFLTGEIPVEIGRLKRLNTIYLYDNQMSGFIPRELTNCTSLSEIDFFGNHFTGHIPETVGKLKNLVLLHLRQNDLSGSIPPSLGYCKSLQVLALADNKLSGSIPHTFSYLSELFKITLYNNSFEGPIPHSLSSLKNLKIINFSHNKFSGSFFPLTSSNSLTLLDLTNNSFSGPIPSNLANSVNLHRLRLGYNNLTGTIPSEFGQLNDLNFFDLSFNSLTGEIPPQLSNSRKIEHILLSNNRLSGKIPNWLGIFQQLGELDLSYNNFTGKLPSEIGNCSNLLKLCLHNNNLSGEIPQEIGNLTSLNVFNIQSNSLNGHIPSTIQQCKKLYELRLSQNFLTGTIPFELGELDELQVILDLSKNLFTGEIPSSLGNLMKLERLNLSFNQLQGKVPTSLGKLTSLHVLNLSNNHLEGQIPSTFSGFPRSSFLNNNRLCGSPLVSCTGSTSQGKMQLSNTQVAVIIVAIVFTSTVICLVMLYIMLRIWCNWRKVSISNDADGGNVAMKKEESRWGCNDQKTRNGEYWNMNSFGFIPSPDKNNSVTTTCFFNIKMEAMENANI* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2907 978 Gene3D Ribonuclease Inhibitor 284 380 IPR032675 -
Tpr5g2907 978 SUPERFAMILY L domain-like 338 664 - -
Tpr5g2907 978 Gene3D Ribonuclease Inhibitor 381 477 IPR032675 -
Tpr5g2907 978 Gene3D Ribonuclease Inhibitor 187 283 IPR032675 -
Tpr5g2907 978 PRINTS Leucine-rich repeat signature 293 306 - -
Tpr5g2907 978 PRINTS Leucine-rich repeat signature 819 832 - -
Tpr5g2907 978 Gene3D Ribonuclease Inhibitor 652 870 IPR032675 -
Tpr5g2907 978 Pfam Leucine rich repeat 776 832 IPR001611 GO:0005515
Tpr5g2907 978 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Tpr5g2907 978 PANTHER UNNAMED PRODUCT 531 918 - -
Tpr5g2907 978 PANTHER UNNAMED PRODUCT 12 571 - -
Tpr5g2907 978 PANTHER UNNAMED PRODUCT 378 735 - -
Tpr5g2907 978 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Tpr5g2907 978 Gene3D Ribonuclease Inhibitor 478 577 IPR032675 -
Tpr5g2907 978 SMART LRR_typ_2 387 411 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 795 818 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 314 339 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 483 507 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 819 842 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 242 266 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 146 170 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 722 746 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 626 650 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 674 698 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 194 217 IPR003591 -
Tpr5g2907 978 SMART LRR_typ_2 98 122 IPR003591 -
Tpr5g2907 978 SUPERFAMILY L domain-like 574 860 - -
Tpr5g2907 978 SUPERFAMILY L domain-like 58 375 - -
Tpr5g2907 978 Gene3D Ribonuclease Inhibitor 578 651 IPR032675 -
Tpr5g2907 978 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Tpr5g2907 978 Pfam Leucine Rich Repeat 148 170 IPR001611 GO:0005515
Tpr5g2907 978 Pfam Leucine Rich Repeat 367 387 IPR001611 GO:0005515
Tpr5g2907 978 Pfam Leucine Rich Repeat 316 336 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2907 Tpr-Chr5 52189484 52192893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2907 170 883 Receptor kinase-like Gene Family AT5G46330 32.116 2.09e-102 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2907 - - gmx:100779315 1472.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2907 5 52189484 52192893 Tpr5g2907 5 52189484 52192893 PCT