Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2903 ATGAAGAAGAAGGGAAAAGTGGCGGTTATTAACACAATCTGTTTGGTTATTATGGCTATGATTTGCAGCACAACCGCTGCTACAAAAGAATCACCACAATACACAATCATTCACACCGACTCCGATTTCGAAATCAGACTCTATCAAACCTCCGTCTGGATATCCACTCCCGCCGTCAACATAATCTCTTTCGAGAAAGCCACATGGAACGGTTTCCACAGATTATTCCAATTCACAGAAGGCGCAAATCTCAATTTCTCTCGAATTCCAATTACTTCTCCAGTATTAACAACCTTGGTTCCTGGATCTGGTCCTCTTGAATCACAAGGCTATTATGTTAGTTTGTATTTGCCGGAAAAGTTTCAAGCGAATCCACCGGTTCCACTTCCGGAACTTAATATTGAGTCATATGAATTTGATAGTCACTGTGTTGCTGTGAGAAAATTCTCTGGAGTTGCGAAGGATGAAAGGATTGTTAAAGAGGCTGAGAAGCTGGATAAGAGTTTGAGTAAGTCTGAGTGGAGTGAGTCGAAGATTGAACATGGTGGTTACTCGATTGCTCAGTATAAATATAGTCCTTTTCGGTTTGCTAAAAGGAGAAATGAGGTTTGGGTTGATATTCATGCTCCTCAATTAGGGTGTAATGATGTTCGTGTTGCAGCATATTGA 669 0.4081 MKKKGKVAVINTICLVIMAMICSTTAATKESPQYTIIHTDSDFEIRLYQTSVWISTPAVNIISFEKATWNGFHRLFQFTEGANLNFSRIPITSPVLTTLVPGSGPLESQGYYVSLYLPEKFQANPPVPLPELNIESYEFDSHCVAVRKFSGVAKDERIVKEAEKLDKSLSKSEWSESKIEHGGYSIAQYKYSPFRFAKRRNEVWVDIHAPQLGCNDVRVAAY* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2903 222 Pfam SOUL heme-binding protein 30 205 IPR006917 -
Tpr5g2903 222 Gene3D Regulatory factor, effector binding domain 29 212 IPR011256 -
Tpr5g2903 222 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 12 209 - -
Tpr5g2903 222 SUPERFAMILY Probable bacterial effector-binding domain 19 207 IPR011256 -
Tpr5g2903 222 PANTHER HEME-BINDING PROTEIN-RELATED 12 209 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2903 Tpr-Chr5 52166585 52167498 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2903 - - gmx:100306073 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2903 5 52166585 52167498 Tpr5g2903 5 52166585 52167498 ECH