Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2901 ATGGCGCTGGTGCGTGTCTTCCCAACCATCACTCTTCCTCGTCTTACTTCAACACTTTCCCTTACAAGAACAAACAAATTCATGGTTCGGAGCTCTAATCTTCAACTCAAAACCCAACCCAATGACTCACGCAAGTTAGTTTTAGAAGTGAAGGATAAGCTTGAAAAAGAATACCATAGTCTTCCCGTTGGTAGAAATGGTAGGGATGATGAAGATATGATACTATGGTTTCTCAAAGATCGAAAATTTGATGTTCAAGAAGCTGTTTCTAAATTGACTAAAGCCATTAAATGGCGTCAAGATTTTGAGGTGTCTAAATTGACTGAAGAAACTGTTAAAGATGTTGCTCAAACTGGAAAAGCATATATACATGATTTTCTAGATATCAATGACAGGCCTGTGCTTGTGGTGGTGGCAGCAAAGCATTTTCCTAAAGCACAGGACCCTGCAGATGATGAAAAGTTATGCGTTTTCTTAATTGAGAAGGCATTGAGTAAGCTACCAACTGGGAAAGAACAGATACTTGGAATATTTGATCTCAGAGGGTTTGGTACAGAAAATGCTGATCTTAAATACTTGACATTCTTGTTTAATGTGTTCTATTATTACTATCCAAAGCGATTATCTCAAGTACTATTTGTAGATGCTCCTTTTGTGTTTAAACCAATTTGGCAGCTTACCAAGCCGATGTTAAAATCATATGCTTCTCTGGTAAGGTTTTGCTCTGCAGAAACTGTTAGGAAGGAATATTTTACCGATGAAACTTTGCCACCAAACTTCAGAGTTTGA 789 0.3777 MALVRVFPTITLPRLTSTLSLTRTNKFMVRSSNLQLKTQPNDSRKLVLEVKDKLEKEYHSLPVGRNGRDDEDMILWFLKDRKFDVQEAVSKLTKAIKWRQDFEVSKLTEETVKDVAQTGKAYIHDFLDINDRPVLVVVAAKHFPKAQDPADDEKLCVFLIEKALSKLPTGKEQILGIFDLRGFGTENADLKYLTFLFNVFYYYYPKRLSQVLFVDAPFVFKPIWQLTKPMLKSYASLVRFCSAETVRKEYFTDETLPPNFRV* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2901 262 SUPERFAMILY CRAL/TRIO domain 110 250 IPR036865 -
Tpr5g2901 262 CDD SEC14 113 260 IPR001251 -
Tpr5g2901 262 Pfam CRAL/TRIO domain 117 257 IPR001251 -
Tpr5g2901 262 SMART sec14_4 115 260 IPR001251 -
Tpr5g2901 262 Gene3D - 15 260 IPR036865 -
Tpr5g2901 262 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 20 261 - -
Tpr5g2901 262 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 111 262 IPR001251 -
Tpr5g2901 262 SUPERFAMILY CRAL/TRIO N-terminal domain 38 110 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2901 Tpr-Chr5 52159652 52163288 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2901 - - vun:114175521 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2901 5 52159652 52163288 Tpr5g2901 5 52159652 52163288 ECH