Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2898 ATGAAAGATTATTATTCAGTTTCAAACACAAAAAAACATATGAAAGAGTCTTTTTTTTCATCTCAATTCACAACAAGACAACAACAATGCAAACAACCAAATCATGTTGTCTCAGAACAAACAAGTTTACTAAATCATTCTCTTAAATTGTCTTCTTCTTCTTCAACTTCCCAAAATACTCTATCACCTATTCTACATGTTTTTGTTACTTTGTTTCTGGTTTTTACCTCAATTAGTCCTATTTTGTCACACCCCATTGTCTCATCAAATTCATCTTCATCAGAACTAAACTCTCATAACAATTTTAACCAAACTTTTCGACCGGATGTTTCATTGCATAAGTTGAGAAGAATTAGAGCTCATTTGAAGAAGATCAACAAGCCTCCCATCAAGACAATTAAGAGTCCAGATGGAGATTTAATAGATTGTATTATATCTCATCAACAACCAGCTTTTGACCATCCAAAACTCAAAGGACAAAAACCATTGGATCCACCAGAAAGGCCAAAAGGATACAACGGCGACAACAATCGAGAAAATGCAACAAATAATTTTCAACTTTGGGTTGATTCTGGTGAAGAATGTCCTAAAGGTACTATTCCAATCAGAAGAACAACAGAACAAGATTTTCTAAGAGCAAATTCTGTTAGAAGATTTGGAAGAAAACCAAGAGGTGTACGGAGAGACTCAACAGGCACAGGTCATGAGCATGCAGTTATGTTTGTAAATGGAGAACAATATTATGGAGCAAAAGCAAGTATAAATGTGTGGACACCAAGAGTAACAGATCAATATGAATTCAGCTTATCACAAATTTGGGTTATTGCTGGATCATTTGGTAATGATCTTAATACAATAGAAGCTGGATGGCAGGTAAGTCCTGAGCTATATGGTGATAATTATCCTAGATTCTTCACTTATTGGACTACGGATGCATATCAAGCAACTGGATGCTACAATTTACTATGTTCAGGATTTATCCAAACAAACAACAGAATAGCAATAGGGGCTGCAATCTCCCCAAGATCAATCTATAGTGGAAGACAGTTTGATATTGGCTTAATGGTTTGGAAAGACCCAAAACATGGACATTGGTGGCTTGAATTTGGGTCAGGGCTACTAGTTGGATATTGGCCAGCAAACTTGTTTAGTCATTTAAGAAGTCATGCAAGTATGGTTCAATTTGGAGGAGAAATTGTGAATTCACGTTCAAGGGGCTACCACACTGGCACTCAAATGGGAAGTGGACATTTTTCAGAAGAAGGTTTTAGAAAAGCAGCTTATTTTAGAAACTTACAAGTAGTTGATTGGGACAATAACTTACTTCCTTTATCAAATATTCACCAATTGGCTGATCATTCAAATTGCTATGATATAAAAGAAGGAAGAAATAATGTTTGGGGAACTTATTTTTATTATGGAGGGCCTGGAAGAAATGTTAGATGTCCATGA 1452 0.3554 MKDYYSVSNTKKHMKESFFSSQFTTRQQQCKQPNHVVSEQTSLLNHSLKLSSSSSTSQNTLSPILHVFVTLFLVFTSISPILSHPIVSSNSSSSELNSHNNFNQTFRPDVSLHKLRRIRAHLKKINKPPIKTIKSPDGDLIDCIISHQQPAFDHPKLKGQKPLDPPERPKGYNGDNNRENATNNFQLWVDSGEECPKGTIPIRRTTEQDFLRANSVRRFGRKPRGVRRDSTGTGHEHAVMFVNGEQYYGAKASINVWTPRVTDQYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFIQTNNRIAIGAAISPRSIYSGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPANLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFSEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIKEGRNNVWGTYFYYGGPGRNVRCP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2898 483 Gene3D - 255 370 - -
Tpr5g2898 483 PANTHER CARBOXYL-TERMINAL PEPTIDASE 49 483 - -
Tpr5g2898 483 Pfam Neprosin activation peptide 132 240 IPR025521 -
Tpr5g2898 483 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 49 483 - -
Tpr5g2898 483 Pfam Neprosin 265 476 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2898 Tpr-Chr5 52133707 52137743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2898 - - gmx:100820129 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2898 5 52133707 52137743 Tpr5g2898 5 52133707 52137743 ECH
Tpr5g2898 5 52133707 52137743 Tpr5g2898 5 52133707 52137743 PCT