Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2896 ATGGAATGTTCAACCTCAAACTTGTTCGACACAGAACAAGTTATCACTCAACAAATCCACACCGTTGATTATTTCACTGCTTCCATCTCCAAATCCATCCAATCCCTCAAAACCACTGCTCAACAAACTTCTCAATATCAAGTTCAATTAGAACAAGTTAAAGGCAAATTGAAGGAAGTGGAAGATGAATTGGTTAAAGTACTCGCAGAAAGGACACGCAAAGAGGCTAAGAGAATGGCTTTGAAAGATGCTATTGCATCTGCAAAGGCAAAAGTTGGAAATCTCAATGCAAGTATTCAAGAGCATCGAAACAGGAAGCAAGAATATACATCATTTCTATCTCAGCAGTCTCTTGCTTTGGCAGCATCTGAGGGGAAGACAAATGATAGCATTGAGCATAGAGATGAAACACATGAGGCTATCTCTTGGTATAACAGGGTACTTGGCTTTCATGTCAAAGGGGGACGTGGGGTAAAGTTCACGTTCAAGAATATAAATTTGAAGAATCCAAACGAGGAGTACTCTTTTACTGTCTGCCATGATAACAATACTTACACGTTGTTAAGATGTGAACCTTCCCTCGATGGTATAGAAGAGTTGGTCCATGAATTAAACAAGACAGATGGTCTGTTTAAGTTTGTCAGAGTAATGAGGAAAAAATTTCAAGAAGCAGTGGCACAAGGGAGCATAGTTTCAACGAGAGTTGAACCTGGAGAATCTACCTTTATCTCTTCATCTGCTCCTGGTACATCCGTTAGAAGTGATTCTACAACCACAGAAAATGAAGAACAAGTAGAACTCTCTGGCAGTAGTGCACAAACAAAGAAAAAAAACATTCGTAGAAGGAAAGGTTTGGCACTTTTATCTCCTGATTCTGCCTCATGTCGTCAGTCTCTGCGTTTGAAGACTAAGAAATAA 918 0.3954 MECSTSNLFDTEQVITQQIHTVDYFTASISKSIQSLKTTAQQTSQYQVQLEQVKGKLKEVEDELVKVLAERTRKEAKRMALKDAIASAKAKVGNLNASIQEHRNRKQEYTSFLSQQSLALAASEGKTNDSIEHRDETHEAISWYNRVLGFHVKGGRGVKFTFKNINLKNPNEEYSFTVCHDNNTYTLLRCEPSLDGIEELVHELNKTDGLFKFVRVMRKKFQEAVAQGSIVSTRVEPGESTFISSSAPGTSVRSDSTTTENEEQVELSGSSAQTKKKNIRRRKGLALLSPDSASCRQSLRLKTKK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2896 305 Coils Coil 85 105 - -
Tpr5g2896 305 Gene3D Chromosome segregation protein Spc25 130 229 - -
Tpr5g2896 305 MobiDBLite consensus disorder prediction 241 283 - -
Tpr5g2896 305 MobiDBLite consensus disorder prediction 241 274 - -
Tpr5g2896 305 Coils Coil 43 77 - -
Tpr5g2896 305 Pfam Chromosome segregation protein Spc25 154 222 IPR013255 GO:0007059|GO:0031262
Tpr5g2896 305 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 12 281 IPR045143 GO:0007059|GO:0031262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2896 K11550 - gmx:100776032 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2896 5 52105671 52110752 Tpr5g2896 5 52105671 52110752 ECH
Tpr5g2896 5 52105671 52110752 Tpr5g2896 5 52105671 52110752 PCT