Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2894 ATGGCTTCCCCTACTCATTTCGACGACGAATTTGATTTTGGAGGTGAAATTAGCGGAACGCGTCCAGGTATTAATAAGAGGTCATCTCCTGATTTTGACGATACCGATTTTGATAATGATCCTTTAGGAAAGAAGGCCAAAACCAAAGCTGAAGTTGAAGTGGCGTCTGGCGTTACAACTGGAATGATTTTGTCTCTTCGCGGGAGTCTTCAAGACTGTAAGGATACGCTTGCGTCGTGCCTGAATGAACTTGAGGCTGCACAAACCGAGATTCAAAAATGGCGCTCTTCATTTCAAAATGAACCATTCATACCTGCTGGGACCACACCAGTACCCAAATTGGTGATTAATTATCTTCAAGCACTGAAATCATCGGAAGAGTCCTTAGGAGACCAGCTTGAAAAGGCAAAGAAAAAGGAAGCTGCATTCATTGTGACATTTGCTAAACGCGAGCAAGAGATAGCAGAGCTGAAGTCTGCTGTACGGGACCTCAAAGCTCAACTCAAGCCAGCATCAATGCAGGCAAGGAGGTTCTTACTAGATCCGGCAGTTCATGAAGAGTTCACACGGTTAAAGAATTTAGTTGCGGAAAAGGACAAAAGAGTAAAGGAGTTGCAAGATAACATTGCTGCTATAAACTTTACTGCCCAAAGCAAGATGGGAAAGTTGCTAATGGCTAAATGTAGAACTCTACAAGAGGAAAATGAAGAGATTGGGCATCAAGCTTCTGAGGGCAAGATGCATGAATTAGCAATGAAACTTTCATTGCAGAAAGACCAGAATTCCGAGCTCAGAAATCAATTTGAAGGGTTGCAGAAGCATATGGATGGATTGACCAATGATGTGGAAAGATCCAATGAAATGGTTTTGATGTTGCAAGATAAAATAAATGAGAAGGATCAGGAGATCCAAAGATTGAAAAATGAGTTGCAACAGAAAAGATCTATTGAGAACGGGAGAACAAATGCAGCATCTAATGCCAGAACTACAGAAGACATTAACTGA 1005 0.4169 MASPTHFDDEFDFGGEISGTRPGINKRSSPDFDDTDFDNDPLGKKAKTKAEVEVASGVTTGMILSLRGSLQDCKDTLASCLNELEAAQTEIQKWRSSFQNEPFIPAGTTPVPKLVINYLQALKSSEESLGDQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPASMQARRFLLDPAVHEEFTRLKNLVAEKDKRVKELQDNIAAINFTAQSKMGKLLMAKCRTLQEENEEIGHQASEGKMHELAMKLSLQKDQNSELRNQFEGLQKHMDGLTNDVERSNEMVLMLQDKINEKDQEIQRLKNELQQKRSIENGRTNAASNARTTEDIN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2894 334 MobiDBLite consensus disorder prediction 27 45 - -
Tpr5g2894 334 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 1 331 - -
Tpr5g2894 334 MobiDBLite consensus disorder prediction 315 334 - -
Tpr5g2894 334 Coils Coil 289 316 - -
Tpr5g2894 334 Coils Coil 147 167 - -
Tpr5g2894 334 Coils Coil 119 139 - -
Tpr5g2894 334 MobiDBLite consensus disorder prediction 1 45 - -
Tpr5g2894 334 Pfam WTAP/Mum2p family 135 289 IPR033757 GO:0000381|GO:0005634|GO:0080009
Tpr5g2894 334 Coils Coil 188 208 - -
Tpr5g2894 334 Coils Coil 70 97 - -
Tpr5g2894 334 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 1 331 IPR033757 GO:0000381|GO:0005634|GO:0080009
Tpr5g2894 334 Coils Coil 247 281 - -
Tpr5g2894 334 MobiDBLite consensus disorder prediction 305 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2894 Tpr-Chr5 52082953 52091346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2894 K22824 - gmx:100776997 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2894 5 52082953 52091346 Tpr5g2894 5 52082953 52091346 ECH