Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2893 ATGGCGCCAAGCATAACAAACCTTAAAGAAACACCTCCCTTCCATGCCAATTCACCCCCCTCCATAAAACTCGAAAACTCAACATTCCTCGCCAACAACAACCCAATCCTCACTCAAGTCCCACCAAACATAACCGTCACTCCACCACCTCACCTTTCCGGTTGCTTCGTCGGATTCAATGCCGACGAACCACGAAACCGCCACGTGGTTTCCATCGGCACCCTCACCGGAATAAGATTCACAAGCATATTCAGATTCAAATTATGGTGGAGCACTCATTGGACAGGAAACAAAGGCAACGACATAGAAAACGAAACACAAATGATAATACTCGAAAACGACACCGTTAAAGAACGTCCTTATGTTCTTCTTTTACCACTCATTGAAGGTTCTTTCAGAGCTTCACTTCAACCAGCATCAAACAAAAACAACCACGTTGATATTTGCATGGAGAGTGGTTCCACACGTGTAACTGAATCATCTTTCAAAACATGTTTATACATTCATGCTAACTTTGATCCTTATATTTTAATGAACGAAGCGATTAAGGTTGTTAGAGACCACTTAGGAACATTCAAACTTCTAGAAGAAAAAACAATACCTGATATTGTTGATAAATTTGGATGGTGTACATGGGATGCATTTTATCTTAAGGTGCACCCTCAAGGTGTAAAAGAAGGTATTAAAGGTTTAGTAGAAGGTGAGTGTCCACCAAGTTTTGTAATCATTGATGATGGTTGGCAAAATTTTTGTCGTGATGATGAAGATTTTTTGAACGGTGGTGATTGTTTAAGTTTGAATTGTGGTATACCAGGTGAACAAATGTTGGGAAGGTTAATAAGTTTTGAAGAAAATAAAAAATTTAAGGACTATGATGAATGTTTAGGTATGGGTGGGTTTGTGAGGGATTTAAAGAGGGAATTTGGGGGGTTGTTAAAGGAGGTTTATGTGTGGCATGCTTTTTGTGGTTATTGGGGTGGGATTAGGCCTAATGTTGAAGGGATGCCGGAGTCGGTGGTGGTGGAGGCGAAGTTGTCGCCAGGGGCTGAGAGGTGTATGACGGATTTGGCGGTGGTGAAGATAGTTGAGAATAGTGTTGGATTGGTGAAGCCAGAAGAGGCGTTTCGGTTGTATGATGGACTTCATTCTCATCTCAAATTTGTTGGCGTTGATGGTGTCAAAATTGATGTCACACATGTTCTAGAGATGTTATCAGAGGAATATGGTGGTCGTGTTGAACTTGGCAAAGCATATTATAAGGCACTAACTGATTCCGTGAAGAAACATTTCAAAGGCAATGGTGTCATTTCCAGCATGCAACAATGCAATGATTTCATGTTCCTTGGTACACAAACCATATCACTTGGACGAGTTGGTGATGATTTTTGGTGCACTGACCCAGCTGGTGATCCAAACGGAACATATTGGCTTCAAGGATGTCACATGGTGCACTGTGCATATAACAGTTTATGGATGGGAAATTTTATACATCCAGATTGGGACATGTTTCAATCTCATCATGCTTGTTCTGAATTTCATGCTGCTTCTCGTGCCATATCTGGTGGACCAATTTATGTTAGTGACTCTGTTGGAAACCACAACTTCAAGCTGCTCAAGAAGCTGGTTTTACCTGATGGAACAATTTTGAGGTGTCAACATTATGCACTTCCAACTAGAGACTCTTTATTTGTTGACCCTTTACATGATGGCAAAACAATGCTCAAAATTTGGAACCTCAACAAATATAGTGGAGTTTTGGGTCTATTCAATTGCCAAGGAGGAGGGTGGTGTCCTTTAACCAGAAGAAACAAGAGTGCCTCTGAATTTTCTCACTCAGTAACTTGCTTTGCAAGTCCTAAAGACATTGAATGGAGCAAAGGGAAAAACCCAATATGCATCAAAGGGGTTGATTTATTTGCTGTCTATATGATTAAGGATGAATATTTGAAGCTACTAAAGTGCACAGAATGTATAGAAGTTTCACTTGAGCCTTTTAGTTTTGAGCTAATGATGGTTTCTCCGGTGACGGTTTTACCTAAAAAATCAATTCAATTTGCACCAATTGGATTGGTGAACATGCTAAACTCTGGAGGTTCAATTCTGTCATTGGAATTTGATGAAGAAGAAAATTTGGTGAAAATTGGGGTGAGGGGTCATGGAGAAATGAGGGTGTTCGCGTCACAGAAGCCGATAAGCTGTTTGATCGATGGAGTGTCTGTGAAATTTGAATATGATGATAGTATGGTAATGCTTCAAGTTCCTTGGCCTGGTTCTACAAAGTTGTCAATGGTTGAATATTTATTCTAA 2307 0.4027 MAPSITNLKETPPFHANSPPSIKLENSTFLANNNPILTQVPPNITVTPPPHLSGCFVGFNADEPRNRHVVSIGTLTGIRFTSIFRFKLWWSTHWTGNKGNDIENETQMIILENDTVKERPYVLLLPLIEGSFRASLQPASNKNNHVDICMESGSTRVTESSFKTCLYIHANFDPYILMNEAIKVVRDHLGTFKLLEEKTIPDIVDKFGWCTWDAFYLKVHPQGVKEGIKGLVEGECPPSFVIIDDGWQNFCRDDEDFLNGGDCLSLNCGIPGEQMLGRLISFEENKKFKDYDECLGMGGFVRDLKREFGGLLKEVYVWHAFCGYWGGIRPNVEGMPESVVVEAKLSPGAERCMTDLAVVKIVENSVGLVKPEEAFRLYDGLHSHLKFVGVDGVKIDVTHVLEMLSEEYGGRVELGKAYYKALTDSVKKHFKGNGVISSMQQCNDFMFLGTQTISLGRVGDDFWCTDPAGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSHHACSEFHAASRAISGGPIYVSDSVGNHNFKLLKKLVLPDGTILRCQHYALPTRDSLFVDPLHDGKTMLKIWNLNKYSGVLGLFNCQGGGWCPLTRRNKSASEFSHSVTCFASPKDIEWSKGKNPICIKGVDLFAVYMIKDEYLKLLKCTECIEVSLEPFSFELMMVSPVTVLPKKSIQFAPIGLVNMLNSGGSILSLEFDEEENLVKIGVRGHGEMRVFASQKPISCLIDGVSVKFEYDDSMVMLQVPWPGSTKLSMVEYLF* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2893 768 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 1 768 - -
Tpr5g2893 768 Gene3D Aldolase class I 206 541 IPR013785 -
Tpr5g2893 768 PANTHER - 1 768 IPR008811 -
Tpr5g2893 768 SUPERFAMILY (Trans)glycosidases 204 553 IPR017853 -
Tpr5g2893 768 Pfam Raffinose synthase or seed imbibition protein Sip1 23 752 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2893 Tpr-Chr5 52077329 52080959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2893 23 768 Glycoside Hydrolase AT5G40390 59.870 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2893 K06617 - gmx:100798883 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2893 5 52077329 52080959 Tpr5g2893 5 52077329 52080959 ECH