Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2892 ATGATGGCGAATCTTCCAGCTATGGTTTCTTTGAAGCACTTTTTGGTGTTATCGTTGGCTTTGAATGTTAGTTTAATTCTGAGAATGGTGTATGAGGGTGATCATTATCAACAAGGAAGTAATAACAACAACAACAAAATGGAAGGGTATAATCGGATTATTGGAAAATCACGTTTGGCTATATCCTCTATAACTTCTTTTGCTAATTCTACTCGTAAAGATCGTTCGGGTATCATGGATAAAGTAATCAATCTTGATCATGGTGATCCAACAATGTACGAACAATTTTGGCGACAAATGGGAGACAAGACAACAATAATAATACCAGGATGGCAATCTATGAGTTATTTTTCTGATCCAACAAGCATATGTTGGTTTCTTGAACCAGAATTTGCTAAGGAAGTAGTGAGGTTACACAATGTGGTTGGAAATGCAGTAACACAAGGTCGTCACATTGTTGTTGGAACAGGTTCTTCTCAATTGATTCTTGCTGCTCTTTATGCTCTTTCTTCTCATGATTCTGATAAACCTATCAGCGTTGTTTCTGCCGTACCTTATTACTCGTCCTATCCATCAATGACAGATTACCAGAAATCAGGACTTTACAAATGGGGTGGTGATGCAGAGAGTTTTGACAAAGATGAGCCTTACATTGAGCTGGTTACTTCTCCAAATAACCCTGATGGATATATAAGGAAATCAATAGTGAACCGAAACCAAGGACTATTGGTTCATGACCTTGCCTATTACTGGCCACAATACACTCCAATATCATCTGCTACAGATTATGATCTTACTCTTTTCACTGTCTCAAAAAGCACTGGTCACGCTGGAATGCGCATAGGGTGGGCTCTTGTTAAAGACCGCGAGGTAGCAAAGAAAATGACAAAATTCATAGAGCTAAATACGATTGGTGTCTCCAAGGATTCTCAACTTAGAGCTGCCAAGGTTTTGAAAACCGTTTCTGACTGCGAAGAAGAAAAATCCGAAAATGGAGTAGAATCCTTTTTCAAGTACAGCTACAGGATGATGGAGCAAAGGTGGAAGCTACTAAGAGAAGCGGTTGATAGTGGTGATTTATTCAGTTTGCCCAAATTTTCTTCTGCGTTTTGCACCTTTCTCAATCAAGAGTCGGAAACTCAACCAGCATTTGCATGGTTGAAGTGTGAAGGGGATATAGAGGACTGTGAAAGTTTCCTTCGTGGACACAAAATTTTGACTAGAGGTGGTAAACAATTTGGGGCTAGCTCAAAATATGTAAGAATTAGCATGCTGGATACAAATGATAATTTTATGCATTTAATAGATAGGCTATCTACAATACAAACCAAACAACAGCAGTGA 1344 0.3869 MMANLPAMVSLKHFLVLSLALNVSLILRMVYEGDHYQQGSNNNNNKMEGYNRIIGKSRLAISSITSFANSTRKDRSGIMDKVINLDHGDPTMYEQFWRQMGDKTTIIIPGWQSMSYFSDPTSICWFLEPEFAKEVVRLHNVVGNAVTQGRHIVVGTGSSQLILAALYALSSHDSDKPISVVSAVPYYSSYPSMTDYQKSGLYKWGGDAESFDKDEPYIELVTSPNNPDGYIRKSIVNRNQGLLVHDLAYYWPQYTPISSATDYDLTLFTVSKSTGHAGMRIGWALVKDREVAKKMTKFIELNTIGVSKDSQLRAAKVLKTVSDCEEEKSENGVESFFKYSYRMMEQRWKLLREAVDSGDLFSLPKFSSAFCTFLNQESETQPAFAWLKCEGDIEDCESFLRGHKILTRGGKQFGASSKYVRISMLDTNDNFMHLIDRLSTIQTKQQQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2892 447 Gene3D - 64 123 IPR037029 GO:0016846
Tpr5g2892 447 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 443 - -
Tpr5g2892 447 Pfam Allinase 83 441 IPR006948 GO:0016846
Tpr5g2892 447 Gene3D - 128 330 IPR015421 GO:0003824
Tpr5g2892 447 CDD AAT_like 129 438 - -
Tpr5g2892 447 Gene3D Aspartate Aminotransferase, domain 1 333 442 IPR015422 GO:0003824
Tpr5g2892 447 SUPERFAMILY PLP-dependent transferases 78 440 IPR015424 -
Tpr5g2892 447 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2892 Tpr-Chr5 52057106 52067308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2892 K16903 - gmx:100818522 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2892 5 52057106 52067308 Tpr5g2892 5 52057106 52067308 ECH
Tpr5g2892 5 52057106 52067308 Tpr5g2892 5 52057106 52067308 PCT