Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2889 ATGTTGCTAGAAACAATGTGGAATGTTCTTTCTTCCTCTCCACAAACACAATTTCACAATCCAATTACAACAACACAACCATGTTACTCTCATCATCTCCGATTCAAACCCATAACAACAAGAATCACTTTCCCTTTCAAACCAAAATGCCACCACCACCACCAACAACAACAACAATCCAAAACCCAAGATGATGGAATCCCAATCGACGACGTAAAAACCTTAGCAAAATTCAAATCAAGACACAACTACATCCGTGTTCTAGAAGTTTCTAGAAAAGCCGACCACCCATTCCGCGGTTCTCGTCTTCTTCTTCTCGACAACCCTGGAAACATTCACAGCATTTCATTTCTCTTCAAAACCCTAACCAACACTTACTTCGACGTTTTCGCTACACTCCCTCCTATCATACCTAAAGGACCCATCGCTGTTCTCGGCTTCGGCGCCGGTTCCACTGCCCGAATCATCCTTAATCTATACCCTGATACGGTTATTCATGGTTGGGAACTTGACCATTCTGTAATTGAAGTTGCTAGAGAGTTTTTCAACCTTGGAAAACTTGAGAGAGAAAATAAAAACAGAATTTTTGTTTATGTTGGAAATGCTTTAACTGCGAATTTGGAAGGTGGGTTTTCTGGGATTTTAGTTGATTTGTTTTCGAAAGGGAGTTTGATACCGGAGCTTCAGGAAGTTGCCACGTGGGAGAAGATTCGCGGGCGGTTGAGGAAAGGTGGGAGGATAATGGTGAACGTTGGAGGGAGTTGTGTGGAGGCTGAGGATAAGGTTAGAGATGGGAGTGTTGTGATGGAAGAGACATTGAAAGCAATGAGAATGGTTTTTGGGGAGAAGCTTTTTGTACTAAGACTTGGGAACCGTGGGGATGATAGTTCTCTTGCTCTTACTGGTGATTTTCCTGAAATTGATGCTTGGAAGAATGCGCTTCCGTCATCGTTGAGATGTTATGTTGATTCATGGACGCCATATTCCGGTTAG 993 0.428 MLLETMWNVLSSSPQTQFHNPITTTQPCYSHHLRFKPITTRITFPFKPKCHHHHQQQQQSKTQDDGIPIDDVKTLAKFKSRHNYIRVLEVSRKADHPFRGSRLLLLDNPGNIHSISFLFKTLTNTYFDVFATLPPIIPKGPIAVLGFGAGSTARIILNLYPDTVIHGWELDHSVIEVAREFFNLGKLERENKNRIFVYVGNALTANLEGGFSGILVDLFSKGSLIPELQEVATWEKIRGRLRKGGRIMVNVGGSCVEAEDKVRDGSVVMEETLKAMRMVFGEKLFVLRLGNRGDDSSLALTGDFPEIDAWKNALPSSLRCYVDSWTPYSG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2889 330 Gene3D Vaccinia Virus protein VP39 79 308 IPR029063 -
Tpr5g2889 330 CDD AdoMet_MTases 142 249 - -
Tpr5g2889 330 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 39 326 - -
Tpr5g2889 330 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 39 326 - -
Tpr5g2889 330 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 68 254 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2889 Tpr-Chr5 52031749 52033066 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2889 - - mtr:MTR_4g105140 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2889 5 52031749 52033066 Tpr5g2889 5 52031749 52033066 ECH