Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2883 ATGAAAAATCAAACCCTGCACCGTGGCAAAGTAGTCAAGTCACATATGGCAAGCGCCACCTTACTTACAATTCTCAAACTTTTGATTACTTTCATATTTGCAGCTTGGATTTCTCTTTGGCTTCTAAAGCCAACCCAAGTATGGACCAGAAAATGGAAACATGCAGAACAAAGTGCCAATAATACAATTTTTGGATACTATGGTCTAAACTTTGCTGTGTATACATTTCCAATAATTGCTATTGCTATTATTGGACTTCTTTTCTTGGATTTGAAAGCTGCATATCAAAGAAACAGAAGTTCAAGGAGTTCATCAAAAATCTTCTCAAATCCACTAGTGGTGAATAGTTTGATTGGAATCTTATCAAGTATTGAAATCCTAGCAGTTTTCCTTGTTATAGTTTTCTTGGCATGGACTTATTATGCTCGTATTTCGAATGATTTCAAAAAGTTGATGCAAGATAAATCACTGAAATTGAACTTATGGCAACTTAAGTATCTCAGAATAGCAACAAGATTTGGTTTGCTAGCAGAAGCTTGTTTGGCGTTGCTTCTTCTTCCAATTTTAAGAGGGTTGTCTCTATTTCGAATATTTGGTATTCAATTTGAAGCTTCAGTTAGGTATCACACATGGATTGGTACTGCAATGATACTTTTTGCTACAATACATGGTATCAGCACTTGGTTTGTTTGGGGGGTCAGCCACCATATACAACATGAGATTTGGAAGTGGCAAAAGACAGGACGTATATACCTTGCTGGAGAGATTGCACTTGTTGTTGGGCTAGTTATATTTGTTTCTTCACTTCCCCAAATCAGAAGAAGAAAGTTTGAAATTTTCTACTACACACATCATTTGTATATAGTCTTTCTAGTATTTTTCTTGTTTCATGCTGGAGATAAGCACTTCTATATGGTCTTCCCAGGAGTATTCCTTTTTAGTCTAGACAAACTGCTCCGAATAATTCAATCAAGCCCAAAAACCTGCATGGTTTCAGCAAGAATTTTTCCCTGTGATGCTGTGGAACTAATTCTGCCTAAAGATCCAAGACTAAAGTATAACCCTACAAGTGTTATATATTTGAAGATACCAAATATATCTCATCTTCAATGGCATTCATTCAGTATAATATCTAGTTCCAAAGGTGATGAAAATATTATGTCTGTGATGATTAAATGTCAAGGGTGGTGGACAAATACTCTTTATGACTTGATACAAACTGAACTGAACAAAGGTGCTGATAAAAGGAAGGGTATACCTGTTGCAATTGAAGGACCTTATGGTCCTGCTGCATTAGATTTTTTAAAATATGACAGTGTACTTATGGTTGCTGGAGGGAGTGGAATAACTCCATTTCTGAGCATTTTGGCAGAAATCGATTCAACTACCAACAGAAATAAATTTCCTTCAAGGATAGAACTTGTGCATGTCATTAAGAGGGCACAAGACATTTGTCTGTTACATTCCATCGTGCATCTGCTAGTCAACCAAACAAGCGAAAAATTTCATTTGAAACTGAAATTGTTTGTAACGCAAGAAACGCAACCAGGCATGGGAATTACAGAGCTGTTAAATGAGTTCGTTAAAGTAAAAACCCTGCAATTGGACAGTGTGAGCTCAAATTATTATGCAGCATATGGACCTGAAAGTCCAGTTTGGATGGCTGCTATTACGGGATGCTGTTCCATCACTTTCTTTGTTTTTCTAATATGTTTCAACCATATTATAATTCCATCTGAAAAGCATTCCAAATTGTCTAAAGAAAAGACTCCATCTTGGATTGTGGATCTAGTTCTGATAGCTGCTTTTGTCCTAGCTTTATCTTGCAGCACTTTGATAGCAATTGTGTTGAGATGGAGAAGGCTGAAGAAAGGGGTTCGCCCAACGTCGCAGACAGAAATTAAACCCTTAGATCTAAGTTCAGCTGACACTAAGAATGCTCTTGAAGAACATGAAGTTCATTTTGGAGGAAGGCCTAACTTTAAAGATATATTAGGCAAGTTCAAGAATGAAACGTCTGGATCTAATGTTGGAGTTTTGGTTTGTGGTCCTGAGAGCATGAAGGGATCAGTGGCGGCCGCGTGCCAGCAAGAATCTGAGTGTTCTAAGTTAAGTGTAGAGACAACAAAACCATGCTTCACTTTCCACTCTCTCAACTTCACACTTTAG 2169 0.373 MKNQTLHRGKVVKSHMASATLLTILKLLITFIFAAWISLWLLKPTQVWTRKWKHAEQSANNTIFGYYGLNFAVYTFPIIAIAIIGLLFLDLKAAYQRNRSSRSSSKIFSNPLVVNSLIGILSSIEILAVFLVIVFLAWTYYARISNDFKKLMQDKSLKLNLWQLKYLRIATRFGLLAEACLALLLLPILRGLSLFRIFGIQFEASVRYHTWIGTAMILFATIHGISTWFVWGVSHHIQHEIWKWQKTGRIYLAGEIALVVGLVIFVSSLPQIRRRKFEIFYYTHHLYIVFLVFFLFHAGDKHFYMVFPGVFLFSLDKLLRIIQSSPKTCMVSARIFPCDAVELILPKDPRLKYNPTSVIYLKIPNISHLQWHSFSIISSSKGDENIMSVMIKCQGWWTNTLYDLIQTELNKGADKRKGIPVAIEGPYGPAALDFLKYDSVLMVAGGSGITPFLSILAEIDSTTNRNKFPSRIELVHVIKRAQDICLLHSIVHLLVNQTSEKFHLKLKLFVTQETQPGMGITELLNEFVKVKTLQLDSVSSNYYAAYGPESPVWMAAITGCCSITFFVFLICFNHIIIPSEKHSKLSKEKTPSWIVDLVLIAAFVLALSCSTLIAIVLRWRRLKKGVRPTSQTEIKPLDLSSADTKNALEEHEVHFGGRPNFKDILGKFKNETSGSNVGVLVCGPESMKGSVAAACQQESECSKLSVETTKPCFTFHSLNFTL* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2883 722 SFLD Ferric Reductase Domain 44 720 - -
Tpr5g2883 722 PANTHER NADPH OXIDASE 16 721 - -
Tpr5g2883 722 Pfam Ferric reductase NAD binding domain 437 696 IPR013121 GO:0016491
Tpr5g2883 722 SFLD Ferric reductase subgroup (FRE) 5 699 - -
Tpr5g2883 722 Gene3D - 614 720 IPR039261 -
Tpr5g2883 722 Gene3D - 421 557 IPR039261 -
Tpr5g2883 722 Coils Coil 718 722 - -
Tpr5g2883 722 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 421 538 IPR039261 -
Tpr5g2883 722 CDD NOX_Duox_like_FAD_NADP 331 512 - -
Tpr5g2883 722 Pfam FAD-binding domain 331 430 IPR013112 GO:0016491
Tpr5g2883 722 Pfam Ferric reductase like transmembrane component 174 294 IPR013130 -
Tpr5g2883 722 PRINTS Cytochrome B-245 heavy chain signature 252 275 IPR000778 GO:0016020|GO:0016491
Tpr5g2883 722 PRINTS Cytochrome B-245 heavy chain signature 277 297 IPR000778 GO:0016020|GO:0016491
Tpr5g2883 722 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 314 433 IPR017927 GO:0016491
Tpr5g2883 722 SUPERFAMILY Riboflavin synthase domain-like 331 429 IPR017938 -
Tpr5g2883 722 PANTHER FERRIC REDUCTION OXIDASE 8, MITOCHONDRIAL 16 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2883 Tpr-Chr5 51978060 51981547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2883 194 722 Miscellaneous Gene Families AT5G50160 48.282 1.14e-178 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2883 K00521 - gmx:100816560 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2883 5 51978060 51981547 Tpr5g2883 5 51978060 51981547 ECH