Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2873 ATGATGCAAGACTCGATCAGTATACCTTCTTGCTTTTCATCAGCTGAGAAGCTAAATGATGATCACGTAGGCGGCGTGGGCGTGGCTCGTTCGGGGCAAAGTGTTTACATGTCAGTATACCGAACAAAAGTAGCCGATCATTGTCGTTTGATAACAATCACATGGTGCAAAAATCTGTTACTTCATGGGCTATCAATATCATTAGAAGGTCCAGAAGGAGAAGCTCAATATACCTGCAAGATTGAACTAAAACCATGGTATTTTTGGAGAAAACAAGGATCAAAGAAGTTTCTAGTAGATGGTAATAAAGCAGTTGATATTTTCTGGGACCTTAAAGCTGCTAAATTCAATGGTGAAACAGAACCAACTTCAGAATACTATGTAGCTGTTGTTTGTGATGAAGAGGTTGTTCTTCTTCTTGGTGATCTTAAAAAAGATGCTTATAGAAGAACAGGTTGTAGACCAGCACTTATTGATCCAATATTGGTTTCAAAAAAAGAACATATTTTTGGTAAGAAAAAATTCTCAACAAGAGCTAAGTTTCATGAGAAAGGTAAATGGCATGAGATTTCAATTGAATGCAAGAATAGAGGAAATGGAAATGGTGGTGAATCTGTTGTTGTTGGATCAGTTCATGTTCAACCAGAAATGGAGATAAGAATTGATGGTCATTTGGTGATTCATGTGAAACATTTGCAATGGAAATTTAGAGGTAATGAATCAGTTCATCTAAGTAAAATGAGAATTGAAGTTTATTGGGATGTTCATGATTGGTTATTTAGTCCTGGTTTAAAACATGCTTTGTTTATTTTTAAACCAATTTTGTCATCTACTATTTCTTCTTGTTCATCTTCTCCTTTATCAATTCAAGCTAGGAGTGTTGAATCAGTTGAAGGATTTAGTGTTAGTGGTTCATCTGAGTTTTGTTTGTTTCTTTATGCTTGGAAGGTTGAATGA 957 0.3532 MMQDSISIPSCFSSAEKLNDDHVGGVGVARSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSISLEGPEGEAQYTCKIELKPWYFWRKQGSKKFLVDGNKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKDAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGKWHEISIECKNRGNGNGGESVVVGSVHVQPEMEIRIDGHLVIHVKHLQWKFRGNESVHLSKMRIEVYWDVHDWLFSPGLKHALFIFKPILSSTISSCSSSPLSIQARSVESVEGFSVSGSSEFCLFLYAWKVE* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2873 318 Pfam Plant protein of unknown function (DUF868) 31 316 IPR008586 -
Tpr5g2873 318 PANTHER EXPRESSED PROTEIN 2 318 IPR008586 -
Tpr5g2873 318 PANTHER OS01G0909400 PROTEIN 2 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2873 Tpr-Chr5 51898536 51900701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2873 8 318 EF-hand Containing Proteins AT5G28150 36.538 8.58e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2873 - - lja:Lj4g3v1415290.1 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2873 5 51898536 51900701 Tpr5g2873 5 51898536 51900701 ECH
Tpr5g2873 5 51898536 51900701 Tpr5g2873 5 51898536 51900701 PCT