Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2870 ATGGGTTCAGAAAATGGTTTTAAAAGTGCACATGACAAACAACCTCTCTTTTCATTTGGATTGATATCTGATGTGCAATATAGCGATATTCCTGACGGTCGTTCGTTCCTCGGTGTTCCTCGTTACTATAGGCATAGCATTCTCGTGTTACAAAGAGCGGTTCAAAATTGGAATAATCATCGAAGACACAAATTTGTGATAAATTGTGGAGATATTGTTGATGGATTTTGTCCAAAAGATCGGTCTCTTAATACTGTAAAGAAAATTGTGGACGAATTCGACAAATTCAACGGACAAGTATATCATTTAATTGGAAATCACTGTCTATACAATCTACCTCGCAAACAATTACTTCCATTATTGAAGATAAATAATCTCGAAGGCCATGCTTATTACGATTTTTCACCCGTGCCCGGCTTTAGATTTGTAGTTCTTGACGGATACGATATAAGTGCTATTGGTTGGCCACAAGATCATCCAAGAACATTGGAAGCAATGAAATTTCTCAAAGAGAAGAATCCAAATGAAGACAAGAACAGTCCAACAGGTTTGGTTGGACTTGAAAGAAGGTTTCTTATGTTCAATGGAGGTATTGGTAAGAAACAAATGGAATGGTTGAATAATGTTCTTCAAGAATCAACAGAAATGAAACAAAAGGTTATGGTTTGTTGTCATTTGCCTCTAGATCCTAGTGCATCATCTAAGGAAGCATTGTTATGGAATTATAATGAAGTAATGAATTTGATACATAGATATAATTGTGTGAAAGTTTGTTTTTCTGGTCATGATCATAAAGGTGGATATTCCATTGATTCACATGGTATACATCATAGAGTTCTTGAAGCTGCATTGGAATGTCCTCCTGGTACAAATTCATTTGGATATGTTGAGGTTTATGATGACAAAATTTCACTTTATGGTACTGACAGAATGAAGAGTACAGACATGTATTTTAACACTCCTAATTTGAATTTATAG 978 0.3497 MGSENGFKSAHDKQPLFSFGLISDVQYSDIPDGRSFLGVPRYYRHSILVLQRAVQNWNNHRRHKFVINCGDIVDGFCPKDRSLNTVKKIVDEFDKFNGQVYHLIGNHCLYNLPRKQLLPLLKINNLEGHAYYDFSPVPGFRFVVLDGYDISAIGWPQDHPRTLEAMKFLKEKNPNEDKNSPTGLVGLERRFLMFNGGIGKKQMEWLNNVLQESTEMKQKVMVCCHLPLDPSASSKEALLWNYNEVMNLIHRYNCVKVCFSGHDHKGGYSIDSHGIHHRVLEAALECPPGTNSFGYVEVYDDKISLYGTDRMKSTDMYFNTPNLNL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2870 325 CDD MPP_Nbla03831 17 305 IPR041869 -
Tpr5g2870 325 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Tpr5g2870 325 PANTHER - 12 321 - -
Tpr5g2870 325 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 12 321 - -
Tpr5g2870 325 SUPERFAMILY Metallo-dependent phosphatases 15 317 IPR029052 -
Tpr5g2870 325 Gene3D - 12 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2870 Tpr-Chr5 51879598 51881732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2870 K01517 - gmx:100780293 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2870 5 51879598 51881732 Tpr5g2870 5 51879598 51881732 ECH
Tpr5g2870 5 51879598 51881732 Tpr5g2870 5 51879598 51881732 PCT
Tpr7g2158 7 28224486 28227050 Tpr5g2870 5 51879598 51881732 PCT