Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2869 ATGGCTTCAACTCCCACTTCCTCTCTCTTTTCAATCCCAATCAACCCAAACCATGTTCTTAAGCCAAAACGTTTCATCTTCCAACCCAATTTACCTTTCTTTAAATCTCTCAAACCCAAACTCCCACTTTCCTGCTCCGCGGTTGCTTTCCCTGGAACCGCGGAGCTGGTAGTTCCTTCCAAGCTTCGAAACTTGGAAGAGGAGTTCCGATCATTACAAGAACCGGTTGATCGGGTGAAGAGACTCTTACACTATGCAGGACTGACACCTTCTATGGATGAGTCGGTTCGGGTTGACAAAAACCGGGTTATGGGTTGTACTGCTAGAGTGTGGGTTGAAGTGAAGATCGACGGTGAAGGGAAGGTGAGATTAACGGCTGATAGTGATTCGGAAATTACAAAAGGGTTTTGTTCGTGTTTGGTTTGGGTTCTTGATGGGTCTGAACCGGAAGAGGTTTTGAAAGTGAGAACCGATGATTTGGTGGGTCTAAATGTTGGTTTACCAGGAACGGGTCGTTCTAGGGTGAACACGTGGCATAATGTTCTTGTTACTATGCAAAAAAAGACGAAACAATTGGTTGCTGAGAGAGAAGGGAAGGTTCTGTTTGAACCTTTTCCTTCTTTAATTGTTACTGCTGATGGTCTTGTTCCTAAGGGTAGTTACGCTGAAGCTCAGGCAACATACTTGTTCCCTAATGAATCAAAAGTCAATGAACTAGTCAATGTGCTGAAGGAGAAGAAAATTGGTGTAGTTGCACATTTTTACATGGATCCTGAAGTCCAAGGCGTTTTAACCACTGCTCAGAAGCAGTGGCCTCATATTCATATATCTGATTCACTGGTCATGGCAGATTCAGCAGTCAAAATGGCAAAAGCCGGATGCAAATTCATAACAGTGCTAGGTGTGGACTTTATGTCAGAAAATGTGCGTGCAATCCTCGATCAAGCTGGTTTCAACGAGGTTGGTGTGTATAGGATGTCGGATGAGCGTATTGGCTGTTCTCTGGCTGATGCTGCAGCTACCTCTACTTATATGGAGTATCTTGAGCCAGCTTCTAGGTCTACTTCTTTGCATGTCATATACATTAACACTAAGTTAGAGACAAAGGCATATGCTCATGAGCTTGTGCCAACAATAACCTGTACTTCATCAAATGTCATCCAAACTATTCTACAGGCATTTGCTCAAGTGCCAGATTTGACCTTATGGTATGGGCCTGATTCTTACATGGGTGCAAATATCGTAGAATTGTTCCAACAGATGACAGTAATGACTGATGAAGAGGTTTCTGCGATACATCCTGAGCATAATGTAGACTCTATTAAAAAATTACTACCTCGGCTTTACTATTATCAGGATGGAACATGCATCGTTCATCATCTATTTGGTCATGAAGTTGTGGAGAAGATAAAAGAAATGTATTGTGATGCATTCCTTACTGCCCATCTTGAGGTACCTGGAGAGATGTTTTCATTGGCAATGGAAGCAAAAAGAAGAAGCATGGGAGTAGTAGGCTCGACCCAGAATATTTTGGATTTCATAAAAGACAGGGTTAAGGAATCTTTGGATAGAAACATCGATGATCATCTCCAATTTGTTTTAGGAACAGAATCTGGGATGGTGACTGCAATTGTGGCAGCGGTTCGAAGTTTGTTAGAGCCTGCAAAGTCATCTTCTCAAGGAGCAAACGTTACTGTTGAAATAGTCTTTCCAGTTTCATCAGAATCAATCTCGACCCCGAGTCTTAACTCAGTTGAAGTTGGTGATATCATACTTCCTGTTGTACCCGGAGTAGCTAGCGGGGAGGGTTGTTCCATTCACGGAGGTTGTGCATCTTGTCCATACATGAAGATGAATTCTCTTAGCTCACTCCTTACAATTTCCCGTCACCTACCTGATGAAGAAAATACGCTGTCTGCATACAAAGCAGAGCGGTTTAAGTTGCAGACTCCAAATGGCCAATCTGTGGCCGATGTAGGATGCGAACCAATTTTGCACATGAGGAACTTCCAGGCAACTAAAAAGCTTCCGGATAAGTTGGTTGATCAGATTCTCCACACCAAAGACAAAGGAGTGTCGGTGTGA 2085 0.4302 MASTPTSSLFSIPINPNHVLKPKRFIFQPNLPFFKSLKPKLPLSCSAVAFPGTAELVVPSKLRNLEEEFRSLQEPVDRVKRLLHYAGLTPSMDESVRVDKNRVMGCTARVWVEVKIDGEGKVRLTADSDSEITKGFCSCLVWVLDGSEPEEVLKVRTDDLVGLNVGLPGTGRSRVNTWHNVLVTMQKKTKQLVAEREGKVLFEPFPSLIVTADGLVPKGSYAEAQATYLFPNESKVNELVNVLKEKKIGVVAHFYMDPEVQGVLTTAQKQWPHIHISDSLVMADSAVKMAKAGCKFITVLGVDFMSENVRAILDQAGFNEVGVYRMSDERIGCSLADAAATSTYMEYLEPASRSTSLHVIYINTKLETKAYAHELVPTITCTSSNVIQTILQAFAQVPDLTLWYGPDSYMGANIVELFQQMTVMTDEEVSAIHPEHNVDSIKKLLPRLYYYQDGTCIVHHLFGHEVVEKIKEMYCDAFLTAHLEVPGEMFSLAMEAKRRSMGVVGSTQNILDFIKDRVKESLDRNIDDHLQFVLGTESGMVTAIVAAVRSLLEPAKSSSQGANVTVEIVFPVSSESISTPSLNSVEVGDIILPVVPGVASGEGCSIHGGCASCPYMKMNSLSSLLTISRHLPDEENTLSAYKAERFKLQTPNGQSVADVGCEPILHMRNFQATKKLPDKLVDQILHTKDKGVSV* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2869 694 Gene3D - 57 194 - -
Tpr5g2869 694 Gene3D - 230 340 IPR036094 GO:0008987|GO:0009435|GO:0051539
Tpr5g2869 694 Pfam Fe-S metabolism associated domain 67 187 IPR003808 -
Tpr5g2869 694 SUPERFAMILY NadA-like 235 633 IPR036094 GO:0008987|GO:0009435|GO:0051539
Tpr5g2869 694 Coils Coil 62 82 - -
Tpr5g2869 694 PANTHER QUINOLINATE SYNTHETASE A 204 684 IPR003473 GO:0008987|GO:0009435|GO:0051539
Tpr5g2869 694 Gene3D - 456 551 IPR036094 GO:0008987|GO:0009435|GO:0051539
Tpr5g2869 694 Gene3D - 341 447 IPR036094 GO:0008987|GO:0009435|GO:0051539
Tpr5g2869 694 Pfam Quinolinate synthetase A protein 240 546 IPR003473 GO:0008987|GO:0009435|GO:0051539
Tpr5g2869 694 SUPERFAMILY SufE/NifU 59 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2869 Tpr-Chr5 51871436 51877992 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2869 K03517 - qsu:112033542 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2869 5 51871436 51877992 Tpr5g2869 5 51871436 51877992 ECH