Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2837 ATGGGCTCTTACAAAAAGTTAATAACTTTCATGTTATTAATTTTTATAGTGATTACATTAAGTGAAGGAAGAGTACCCTTTGCATGTGACCCAAACAATGGTTTAACAAGAGGGTACAAATTTTGCAATACAAGAGTGCCAATTCATGTTAGAGTACAAGACCTTATAGGAAGACTTACATTGCCTGAAAAGATAAGGCTAGTTGTGAACAATGCAATTGCAATTCCAAGACTTGGAATACAAGGCTATGAGTGGTGGTCGGAGGCTTTACACGGTGTTTCGAATGTGGGCCCGGGTACTAAATTTGGTGCGGCCTTTCACGCCGCCACTAGCTTCCCTCAAGTTATCACCACTGCTGCTTCTTTCAATCAATCTTTGTGGCTTGAAATTGGTCGGATTGTGTCTGATGAAGCAAGAGCAATGTACAATGGTGGAGCTGCAGGATTGACATTTTGGAGTCCTAATGTAAATATTTTCCGTGATCCACGGTGGGGCCGTGGCCAGGAGACACCCGGCGAAGACCCCACCTTGGCTGCAAAATATGCCGCCAGCTATGTTCAAGGACTACAAGGCAACGGCGCGGGTAACCGCCTCAAGGTTGCTGCTTGTTGTAAACATTACACTGCCTATGATCTTGACAATTGGAATGGTGTAGATAGATTTCATTTCAATGCCAAGGTTAGTAAACAGGACTTGGCGGACACATATGACGTACCATTCAAAGCGTGTGTGTCGGAAGGAAAGGTGGCCAGTGTAATGTGTTCCTACAATCAGGTCAATGGCAAGCCCACTTGTGCTGATCCCGAACTCCTTCGCAACACCATCCGCGGTGAATGGGGCCTCAATGGGTACATTGTATCAGACTGTGATTCAGTTGGAGTTTACTACGACACCCAACACTACACAAGAACACCCGAAGAGGCAGCAGCAGCCGCGATTAAAGCGGGTCTAGATTTGGATTGTGGTCCATTTTTGGCTCTACATACTGATGGTGCTATTAAGCAAGGACTTATGTCTGAAAACGATCTTAATCTTGCTTTAGCTAACCTTATCACCGTCCAAATGAGATTGGGTATGTTTGATGGTCCGGCCCAACCATATGGTAATTTGGGCACAAATATTGTTTGTTTACCGGCCCATAATGAAGTTGCAGTTGAGGCAGCTAGACAGGGTATTGTTCTCCTACAAAACAAAGGAAATGCATTGCCATTGAACCCTACAAGATACCGCACCGTAGGAGTTATTGGACCTAATTCTGATGTTACTGAAACTATGATAGGGAACTATGCTGGTGTGGCGTGTGGTTATACGACGCCGTTACAAGGGATTGCAAGATATGTGAGAACCCTCCATCAAGCAGGATGTAGCAATGTTGCTTGTAGTGGGAACCAACTATTTGGGTCAGCTGAAACAGTAGCAAGGCAAGCCGATGCAACAGTATTAGTAATGGGCCTAGATCAGTCCATAGAAGCAGAATTTAGAGACAGAGTTGGGCTTCTTTTACCAGGCCACCAACAAGAGCTAGTGTCTAGAGTAGCTAGGGCTGCAAGAGGCCCAGTTATCTTAGTACTCATGTCTGGTGGGCCTATTGATGTTACATTTGCCAAAAATGATCCCAAGATTAGTGCCATTTTGTGGGTTGGTTATCCTGGTCAATCTGGTGGTACTGCCATTGCTGATATCATCTTTGGTAGAACTAATCCAGGAGGAAGATTACCTAATACATGGTACCCACAAAATTATGTGGCCAAAGTACCAATGACAAACATGGACATGCGTCCAAATCCAGCAATAGGGTACCCAGGAAGAACCTATAGATTCTACAAAGGCCCAGTAGTTTTCCCATTTGGGCATGGACTAAGTTACTCAAGATTCACACATACCCTAGCACTTGCTCCAAAACAAGTCTCAGTTCAATTTACAACCACTCATGCCCAAGCCTTCACAAACTCAAGTAACAAAGCAATGAAAGTGAGTCATGCAAAATGTGATGAGTTGGAATTAGGATTTCATGTTGATGTGAAAAATGAAGGGTCAATGGATGGGTCTCACACACTTCTTATTTTCTCAAAACCACCTAATGGTGTTAAACAATTGGTGAATTTTCATAAGACTTATGTTCATGCTGGATCAAAGACACGTGTTAAGGTTGGTGTTCATGTTTGTAACCATCTTTCTAGTGTTGATGAGTTTGGGGTTAGAAGAATCCCAATTGGTAAACATGAACTACAAATTGGTGATCTCAAACATTCTCTTTTGGTTCAAACTTTGGACCAAATTAAACATTAA 2289 0.4312 MGSYKKLITFMLLIFIVITLSEGRVPFACDPNNGLTRGYKFCNTRVPIHVRVQDLIGRLTLPEKIRLVVNNAIAIPRLGIQGYEWWSEALHGVSNVGPGTKFGAAFHAATSFPQVITTAASFNQSLWLEIGRIVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVQGLQGNGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDVPFKACVSEGKVASVMCSYNQVNGKPTCADPELLRNTIRGEWGLNGYIVSDCDSVGVYYDTQHYTRTPEEAAAAAIKAGLDLDCGPFLALHTDGAIKQGLMSENDLNLALANLITVQMRLGMFDGPAQPYGNLGTNIVCLPAHNEVAVEAARQGIVLLQNKGNALPLNPTRYRTVGVIGPNSDVTETMIGNYAGVACGYTTPLQGIARYVRTLHQAGCSNVACSGNQLFGSAETVARQADATVLVMGLDQSIEAEFRDRVGLLLPGHQQELVSRVARAARGPVILVLMSGGPIDVTFAKNDPKISAILWVGYPGQSGGTAIADIIFGRTNPGGRLPNTWYPQNYVAKVPMTNMDMRPNPAIGYPGRTYRFYKGPVVFPFGHGLSYSRFTHTLALAPKQVSVQFTTTHAQAFTNSSNKAMKVSHAKCDELELGFHVDVKNEGSMDGSHTLLIFSKPPNGVKQLVNFHKTYVHAGSKTRVKVGVHVCNHLSSVDEFGVRRIPIGKHELQIGDLKHSLLVQTLDQIKH* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2837 762 Gene3D - 378 623 IPR036881 GO:0004553|GO:0005975
Tpr5g2837 762 SUPERFAMILY (Trans)glycosidases 39 391 IPR017853 -
Tpr5g2837 762 Gene3D - 51 368 IPR036962 GO:0004553|GO:0005975
Tpr5g2837 762 SMART Fn3_like_2 684 749 IPR026891 -
Tpr5g2837 762 Pfam Glycosyl hydrolase family 3 N terminal domain 105 322 IPR001764 GO:0004553|GO:0005975
Tpr5g2837 762 PRINTS Glycosyl hydrolase family 3 signature 112 131 IPR001764 GO:0004553|GO:0005975
Tpr5g2837 762 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Tpr5g2837 762 PRINTS Glycosyl hydrolase family 3 signature 274 292 IPR001764 GO:0004553|GO:0005975
Tpr5g2837 762 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 392 625 IPR036881 GO:0004553|GO:0005975
Tpr5g2837 762 Gene3D Immunoglobulins 646 762 IPR013783 -
Tpr5g2837 762 PANTHER BETA-D-XYLOSIDASE 1 7 756 - -
Tpr5g2837 762 PANTHER SUGAR HYDROLASE-RELATED 7 756 IPR044993 GO:0009044|GO:0045493
Tpr5g2837 762 Pfam Glycosyl hydrolase family 3 C-terminal domain 392 622 IPR002772 GO:0004553|GO:0005975
Tpr5g2837 762 Pfam Fibronectin type III-like domain 695 747 IPR026891 -
Tpr5g2837 762 Coils Coil 760 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2837 Tpr-Chr5 51543759 51550565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2837 6 755 Glycoside Hydrolase AT5G49360 71.485 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2837 - - gmx:100812823 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2837 5 51543759 51550565 Tpr5g2837 5 51543759 51550565 ECH