Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2809 ATGGCTTCTTTCATTGCTAGAACCAAGAGGTTCTCTTTGGCCACTCCACTATTTCTATTGGGATTATTCACAATAAACCTTATTCCCATGGCAGATGCTCAAATAGGCGTATGTTATGGTATGATGGGAAACAATTTACCACCAGCAAATGAAGTAATAGACCTCTATAAAGCAAATAACATCAAGAGAATGAGACTATATGATCCTAATCAAAATGCTCTAAATGCATTAAGAAATTCAGGCATTGAAGTCCTTCTTGGTGTGCCAAATTCTGATCTTCAAAGCTTAGCTACAAATGCTGATAATGCACGTCAATGGGTACAAAAAAATGTATTGAATTTTTGGCCTAGTGTGAAATTCAAGATAATTGCAGTCGGTAATGAAGTGAGTCCAGTTGGAGGGTCAGCCCAATATGTTTTACCTGCCACCCAAAACATATATCAAGCAATAAGAGCACAAGGTCTTCATGATCAAATCAAGGTTTCAACTGCTATTGACACAACCCTTATTGGAACCTCTTTCCCACCATCTAAAGGTTCTTTCAGGGGTGATGTGAGGTCATACCTAGACCCTATTATAGGGTACTTGGTATATGCAGGTGCACCGTTACTTGTCAATATTTATCCCTATTTTAGTTATGCAGGTAACCCGCGTGACATATCACTTCCTTATGCTCTTTTTACCTCCCCGAATGTTATGGTACAAGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTATGTTGGATTCAGTGTTTGCAGCCTTAGATAACACCGGGATTGGTTGGGTGAATATTGTTGTATCTGAGACCGGTTGGCCCTCGGACGGAGGGGCTGGTACTTCATATGATAATGCGCGTATTTACCTCGATAATTTGATTCGTCATGTTGGTAAGGGTACTCCAAGAAGGCCTTGGGCTGTAGACACTTATATTTTTGCTATGTTTGATGAGAATCAAAAGAGTCCTGAATTGGAGAAACATTTTGGAGTGTTTTATCCCAATAAACAAAAGAAGTACCCATTTGGATTTGGAGGAGAAAGAAAAATTGCGGATGGTACCTTCAATGCAACAACTTCTCTTAAGAGTGACATGTAA 1098 0.3934 MASFIARTKRFSLATPLFLLGLFTINLIPMADAQIGVCYGMMGNNLPPANEVIDLYKANNIKRMRLYDPNQNALNALRNSGIEVLLGVPNSDLQSLATNADNARQWVQKNVLNFWPSVKFKIIAVGNEVSPVGGSAQYVLPATQNIYQAIRAQGLHDQIKVSTAIDTTLIGTSFPPSKGSFRGDVRSYLDPIIGYLVYAGAPLLVNIYPYFSYAGNPRDISLPYALFTSPNVMVQDGQYGYQNLFDAMLDSVFAALDNTGIGWVNIVVSETGWPSDGGAGTSYDNARIYLDNLIRHVGKGTPRRPWAVDTYIFAMFDENQKSPELEKHFGVFYPNKQKKYPFGFGGERKIADGTFNATTSLKSDM* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2809 365 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 24 350 - -
Tpr5g2809 365 Gene3D Glycosidases 34 345 - -
Tpr5g2809 365 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Tpr5g2809 365 Pfam Glycosyl hydrolases family 17 35 342 IPR000490 GO:0004553|GO:0005975
Tpr5g2809 365 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 350 IPR044965 GO:0004553|GO:0005975
Tpr5g2809 365 SUPERFAMILY (Trans)glycosidases 35 343 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2809 Tpr-Chr5 51079027 51082092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2809 41 354 Glycoside Hydrolase AT4G16260 62.776 1.91e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2809 - - ccaj:109791097 590.882