Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2796 ATGGCAAATGAACAAATGAAACCAATTGCTACACTTCTTTTGGGGCTGAATTTTTGCATGTATGTCATAGTTTTAGGCATTGGTGGATGGGCCATGAATAAAGCCATAGATCATGGTTTTGAAATAGGTCCAGGATTCGATCTTCCCGCACATTTTTCACCGATATACTTCCCTATGGGAAATGCTGCAACTGGATTCTTTGTGACATTTGCATTGATTGCTGGAGTTGTTGGGGCAGGATCATTCATTTCAGGACTCAATCATATTCGTTCATGGACTTCAGAGAGCTTGCCATCTGCAGCTTCAGTTGCTTCCATTGCATGGGCTCTTACACTTCTTGCCATGGGTTTTGGATGCAAAGAGATTCAGCTAAATGTCAGAAATTCTCGTCTGAAAACTATGGAGGCTTTTCTGATTATCCTTTCAGCTACACAGCTTTTCTACATAGCTGCTATTCATGGTGCTGCTGCAATAAGGAGATAA 483 0.4141 MANEQMKPIATLLLGLNFCMYVIVLGIGGWAMNKAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFVTFALIAGVVGAGSFISGLNHIRSWTSESLPSAASVASIAWALTLLAMGFGCKEIQLNVRNSRLKTMEAFLIILSATQLFYIAAIHGAAAIRR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2796 160 PANTHER ABA INDUCED PLASMA MEMBRANE PROTEIN 1 160 - -
Tpr5g2796 160 PANTHER AWPM-19-LIKE FAMILY PROTEIN 1 160 IPR008390 -
Tpr5g2796 160 Pfam AWPM-19-like family 16 155 IPR008390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2796 Tpr-Chr5 50501007 50502553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2796 1 154 Miscellaneous Gene Families AT5G46530 74.026 5.85e-84 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2796 - - gmx:100527291 280.026