Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2775 ATGGCACCTTCTATGGCAACATTAACCACTCTCATTACCATACTTTTCTCAATAGCTTCTTCTGCAGTATCAACTGCACAAGAATCTACAAGACCCTTTAAGAAAATTTACGCCTTCGGCGACTCGTTCACAGACACCGGTAACACGAAAAACGCCGAAGGACCAAGTGGTTTTGGCCATGTATCAAACTCACCATATGGCACAACATTTTTCAACCATTCCACAAATAGATACTCAGATGGAAGACTTGTTATAGATTTTGTAACTGAATCACTTTCTTTGCCTTATCTTCCGCCTTATCGACACATCAAACGATACAATGACACTTTTGGTGTTAACTTTGCTGTTGGTGGTTCAACAGCTATAAACCATGAGTTCTTTGTTAGGAACAATCTTTCACTTGATATTACTCCTCAATCTATTCAAACTCAGATTTTGTGGTTTAATAGGTATTTGGAGAGACAAGGATCATGTCAAGGTGTTGATTCAAATTGTAGAGATTTTGATGATACTCTTTTTTGGTTTGGTGAAATTGGTGTTAATGATTATGCTTATACTCTTGGATCTACAGTCTCACGTGATACTATAAAGAAGCTTGCAATTTCAAGTATCTCAGGAGCATTGCAGACATTGCTTGAGAAGGGTGCTAAGTACCTAGTTGTACAGGGTGCCCCTCTAGCTGGATGTCTACCATTAACAATGTACTTAGCTCCTGAAGATGACAGAGATAGCATAGGATGTGTGAAAAGTGCTAATGAACAAAGCAACAATCACAACCTTATGCTACAAGACAAATTACAAGAATTAAGAAATAAGTATCCAAATGCTGTCATAGTTTATGCTGATTACTTGAATGCATACCGTACTGTGATGAAGAATCCAAGTAAGTATGGATTCAAAGAAATGTTCAGAGTCTGCTGTGGATCAGGAGAAGCTCCTTACAATTTCAATGTATTTGCTACTTGTGGTACACCTAATGCAACTGTTTGCAGTAGCCCTTCTCAGTATATTAATTGGGATGGTGTTCATCTTACAGAAGCTATGTATAAGGTTGTTTCTAATATGTTTTTGCAAGGAAACTTCACTCAACCTCCATTTGATTTTTTGTTGGAAAACAAAGAGAGGAATGGCTAG 1134 0.3765 MAPSMATLTTLITILFSIASSAVSTAQESTRPFKKIYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVTESLSLPYLPPYRHIKRYNDTFGVNFAVGGSTAINHEFFVRNNLSLDITPQSIQTQILWFNRYLERQGSCQGVDSNCRDFDDTLFWFGEIGVNDYAYTLGSTVSRDTIKKLAISSISGALQTLLEKGAKYLVVQGAPLAGCLPLTMYLAPEDDRDSIGCVKSANEQSNNHNLMLQDKLQELRNKYPNAVIVYADYLNAYRTVMKNPSKYGFKEMFRVCCGSGEAPYNFNVFATCGTPNATVCSSPSQYINWDGVHLTEAMYKVVSNMFLQGNFTQPPFDFLLENKERNG* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2775 377 Coils Coil 252 272 - -
Tpr5g2775 377 CDD SGNH_plant_lipase_like 36 360 IPR035669 -
Tpr5g2775 377 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 6 374 - -
Tpr5g2775 377 SUPERFAMILY SGNH hydrolase 33 357 - -
Tpr5g2775 377 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 6 374 - -
Tpr5g2775 377 Pfam GDSL-like Lipase/Acylhydrolase 36 354 IPR001087 GO:0016788
Tpr5g2775 377 Gene3D SGNH hydrolase 22 360 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2775 Tpr-Chr5 49865494 49867880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2775 3 359 Acyl Lipid Metabolism Gene Families AT4G10950 25.737 2.06e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2775 - - lja:Lj4g3v1389220.1 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2775 5 49865494 49867880 Tpr5g2775 5 49865494 49867880 ECH