Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2772 ATGGCATCAGAAGGAGAAGAATCTCAGCTGTTACAACTCATTCTCGCCGACAAACTCTTCCTCCTCAAACAATCCGATGTTCAAGACATCGACAAAGTTCGATTTAGAGAAGATGTCGTCAATGTCGTTAAGGAACATGATATGCTTCCTTTATACGAAACCCTAGTTGCTGATGGAATTTTGGATTTGGATCCTGTCCTTCGGGACTCTATGCGTGCTAAAATCGACGATGAAGTTAACAAGCTTAATGAAAAGATTGCTGACGCCGAGGAAAACTTAGGCGAGAGTGAAGTCCGTGAGGCTCACTTGGCAAAATCCTTGTTTTTCATCCGGATTGGGGACAAGGAGAAAGCCTTGGAACAACTCAAGGTAACAGAAACCAAGACTGTTGCAGTGGGGCAGAAGATGGACCTGGTGTTCTATACATTGCAACTTGGTTTCTTTGACATGGATTTTGATCTCATTTCCAAAAGCATTGACAAAGCTAAAAGCTTGTTTGAAGAAGGTGGTGATTGGGAGAGGAAGAACCGTCTGAAAGTGTATGAAGGCCTCTATTGCATGTCCACTAGAAATTTCGAGAAGGCTGCCTCATTGTTTTTGGATTCTATTTCAACCTTCACAACCTATGAACTTTTTCCGTATGACACCTTTATATTTTACACCGTTTTGACAAGCATCATAACATTGGATAGAGTTTCCTTAAAGCAAAAGGTAGTGGATGCTCCTGAGATCTTGACAGTGATCGGCAAAATCCCACATCTTTCAGAGTTTTTGAACTCCTTATACGATTGTCAATACAAGTCTTTCTTCTCAGCTTTTGCTGGCTTGACGGAGCAAATTAAGTTGGATCGCTATCTGCATTCACACTTCCGGTACTACATGAGAGAGATTAGAACTGTTATCTATTCTCAGTTTTTGGAATCTTACAAGAGTGTGACCATCGAAGCCATGGCAAAAGCATTTGGAGTGTCGGTGGATTTCATTGATGTGGAGCTATCACGCTTTATTGCAGCTGGAAAACTTCATTGTAAGATCGATAAAGTTGCAGGCGTTCTTGAAACAAACCGCCCTGATGCCAAAAATGCTCTATACCAAGCAACTATTAAGCAAGGGGATTTCTTATTGAACAGGATCCAAAAATTGTCGCGTGTGATTGATCTTTAG 1164 0.4132 MASEGEESQLLQLILADKLFLLKQSDVQDIDKVRFREDVVNVVKEHDMLPLYETLVADGILDLDPVLRDSMRAKIDDEVNKLNEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEQLKVTETKTVAVGQKMDLVFYTLQLGFFDMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMSTRNFEKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIITLDRVSLKQKVVDAPEILTVIGKIPHLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHSHFRYYMREIRTVIYSQFLESYKSVTIEAMAKAFGVSVDFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2772 387 PANTHER 26S PROTESOME SUBUNIT 6 5 387 IPR019585 -
Tpr5g2772 387 PANTHER OS02G0600100 PROTEIN 5 387 - -
Tpr5g2772 387 Gene3D - 15 338 - -
Tpr5g2772 387 SMART PINT_4 288 371 IPR000717 -
Tpr5g2772 387 Coils Coil 72 99 - -
Tpr5g2772 387 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 288 371 - -
Tpr5g2772 387 Pfam 26S proteasome subunit RPN7 64 237 IPR045135 -
Tpr5g2772 387 ProSiteProfiles PCI domain profile. 191 359 IPR000717 -
Tpr5g2772 387 SUPERFAMILY "Winged helix" DNA-binding domain 283 364 IPR036390 -
Tpr5g2772 387 Pfam PCI domain 253 355 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2772 Tpr-Chr5 49843355 49847061 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2772 K03037 - gmx:100810692 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2772 5 49843355 49847061 Tpr5g2772 5 49843355 49847061 ECH