Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2752 ATGGATTCAATTTCTTCTTCCGGTGGTGGTGCTTCTCAATACCTCGTCAATCTTCCCTCTCGCGGCACCTTCACTTCCCCTTCAATTTCTTGCAATTCGAATGGGATGCGGGTTTATGTATGCGATCACAAGACCACACCACCAGAAGGGCAACATATTAAGACAAATACACAGAACATACTGATCAGAGCACTCACATTGAAGAATGACAATTCAAAAAAGAGAACTGCTGAAAAGGGTCTGGGAGGTCCAGCCAAGAAACCAAATAATCAAGCAAACTCTCAACAAGAGGGATCAAACGGTCGAACATCCAATCGGAACTTCCAAAGCTTGACTGTAGACAAGCTTCGAGCTCTTTTAAAAGCTAAAGGTCTTCCAACCAAAGGAAAGAAGGAGGAGCTTATTACGCGTCTAAAAGATGCAGCTGGGAAAGCATAG 438 0.4384 MDSISSSGGGASQYLVNLPSRGTFTSPSISCNSNGMRVYVCDHKTTPPEGQHIKTNTQNILIRALTLKNDNSKKRTAEKGLGGPAKKPNNQANSQQEGSNGRTSNRNFQSLTVDKLRALLKAKGLPTKGKKEELITRLKDAAGKA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2752 145 MobiDBLite consensus disorder prediction 65 110 - -
Tpr5g2752 145 MobiDBLite consensus disorder prediction 87 110 - -
Tpr5g2752 145 SUPERFAMILY SAP domain 103 140 IPR036361 -
Tpr5g2752 145 SMART sap_9 108 142 IPR003034 -
Tpr5g2752 145 Gene3D SAP domain 85 145 IPR036361 -
Tpr5g2752 145 Pfam Det1 complexing ubiquitin ligase 15 70 IPR018276 -
Tpr5g2752 145 Pfam SAP domain 108 141 IPR003034 -
Tpr5g2752 145 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 5 140 - -
Tpr5g2752 145 ProSiteProfiles SAP motif profile. 108 142 IPR003034 -
Tpr5g2752 145 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 5 140 IPR033575 GO:0032434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2752 - - gmx:100306690 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2752 5 49646710 49650352 Tpr5g2752 5 49646710 49650352 ECH