Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2750 ATGGCAATGACAATGGCAACCATGCAAGAGATGCCAAGAAGCCCAGAAGCAAAACTTGGGTTAAGAGTTAAAGATCTATGGGATCATCAAGAGGCACAATTAAGTCCTGATGAGAAACTTAATGCTTGTTTTGAAAATATCCCTGTTTCTGCTTTTCCTTTACCTCTTGCAACCCAAGATATTGAAATAAAATCAGATGCTACCTTAGCTGAAGCTGTGAAAATACTGGCACATCACAATATTCTGAGTGCACCTGTGGTGAATGTTGATGCACCTGAAGATGCTAGTTGGATTGATAGATACATCGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATTTTGCATCAGTCTGAACCTCCATCTCCTAGGACTCCATCCACTCCTAGGAGTCCATCCAGTGCAAGTGCTATTGCAGCCGCGGCAAACGGAAATACTTTCGCTCTTGAACTCGAAGCCTTAGGCCTCGGATCTGCCGCAACAACTTCAGGAGACTTTTTTGAGGATCTCACTTCTTCTGAACTTTATAAGAACACCAAGGTTGGAGATATTTCAGGGACATTCCGATGGGCTCCGTTTCTTGCTTTGGAGAGATCGAACTCATTTCTAACCATGCTCTTGTTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGGTAGATTTGGGTGCTGGTAGAATTGATAACATCATCACACAACCTGCCGTGATTCATATGTTGGCAGAATGCGTCGGACTTCAGTGGTTTGAAAGTTGGGGAACCAAGGAACTGTCTCATGTTGGTCTTCCCCTTGTGACACCACAACAGATCGTCAAGGTTTATGAGGATGAACCTGTCCTTCAAGCATTTAAAGAAATGAGGAAAAAGAGGGTTGGAGCGTTGCCTGTAATCGAAAGAGGTGGCACCAAACCAGTTGGTAATATAAGCTTGCGAGATGTTCAATTCTTGCTAACTGCCCCAGAAATCTATCATGATTATAGAGCTGTTACAGTGAAGGATTTCCTGAGTGCAGTTAGAAGCTACTTAGAGAAGAATAAAAACATATTCACAATGTCAGGTGAATTTGTTACATGCAAAAAAGACTGTACAGTCAAAGACTTGATTCAATTGCTCGACAAAGAGAAGCTTCACAGGGTGTATGTTGTGGACGACGAAGGGAATCTTGAAGGACTAATCACACTAAGAGATATCATCTCAAGGCTAGTACATGAACCACGCGGCTACTTTGGTGATTTCTTCGACGGTGTTCTCCCTCTACCTGCTAACAGCAGGGTTTAA 1278 0.4264 MAMTMATMQEMPRSPEAKLGLRVKDLWDHQEAQLSPDEKLNACFENIPVSAFPLPLATQDIEIKSDATLAEAVKILAHHNILSAPVVNVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPPSPRTPSTPRSPSSASAIAAAANGNTFALELEALGLGSAATTSGDFFEDLTSSELYKNTKVGDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIDNIITQPAVIHMLAECVGLQWFESWGTKELSHVGLPLVTPQQIVKVYEDEPVLQAFKEMRKKRVGALPVIERGGTKPVGNISLRDVQFLLTAPEIYHDYRAVTVKDFLSAVRSYLEKNKNIFTMSGEFVTCKKDCTVKDLIQLLDKEKLHRVYVVDDEGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANSRV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2750 425 PANTHER BNAA06G16460D PROTEIN 10 425 - -
Tpr5g2750 425 SUPERFAMILY CBS-domain pair 32 241 IPR046342 -
Tpr5g2750 425 CDD CBS_pair_SF 268 398 - -
Tpr5g2750 425 SUPERFAMILY CBS-domain pair 268 411 IPR046342 -
Tpr5g2750 425 ProSiteProfiles CBS domain profile. 56 122 IPR000644 -
Tpr5g2750 425 ProSiteProfiles CBS domain profile. 351 409 IPR000644 -
Tpr5g2750 425 Gene3D - 40 247 IPR046342 -
Tpr5g2750 425 SMART cbs_1 269 318 IPR000644 -
Tpr5g2750 425 SMART cbs_1 192 241 IPR000644 -
Tpr5g2750 425 SMART cbs_1 354 402 IPR000644 -
Tpr5g2750 425 SMART cbs_1 59 115 IPR000644 -
Tpr5g2750 425 Gene3D - 254 404 IPR046342 -
Tpr5g2750 425 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 10 425 - -
Tpr5g2750 425 ProSiteProfiles CBS domain profile. 265 326 IPR000644 -
Tpr5g2750 425 Pfam CBS domain 269 313 IPR000644 -
Tpr5g2750 425 Pfam CBS domain 351 402 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2750 Tpr-Chr5 49629157 49632138 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2750 - - gmx:100818156 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2750 5 49629157 49632138 Tpr5g2750 5 49629157 49632138 ECH
Tpr5g2750 5 49629157 49632138 Tpr5g2750 5 49629157 49632138 PCT