Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2732 ATGTGTTTAAACTCTTTCCTCCAGATATATACAACACAAGACACACTATACAGAACAGAGCAACAACAACACTCAACACCGATTCCAGCAACTCGTTCATCTGAGTTAATGGGTATCCGGTTCTCAATTTCATCATCACAACCGTCAAAACCGAGTTTAGGAGAATTACCTGAAAGCTGCGTAGCTGTTATAATGGAATATATGGATCCACCTCAGATTTGTAAATTAGCTTCTTTGAATCGAGCTTTTCGTGCTGCTTCTTCAGCTGATTTTGTTTGGGAATCCAAACTACCCCCTAATTATCACCTCATCATCCGCAAAATATTCGATGTTTCTTTTCCTTCTCATTTAGAGAAAAGAGGAATTTATTCGCGCCTCTGTTCTCTTAATACCTTCGATGGAGGCACAAAGAAAGTTTGGTTGGATAGAAGCATGGGTAAGCTATGTTTGTCTATTTCGGCTAAAGGATTGTCAATAACATATATTGATGATAGAAGATATTGGAACCATATACCTACTGAAGAATCAACATTCAGTAGTGTTGCATATCTCCAGCAAATCTGGTGGTTTGAAGTGGATGGTGAAGTTGAGTTCCCATTTCCAGCTGGAACATATAGCTTATTCTTCAGAATACATCTTGGAAAAGCCTCCAAAAGATTTGGAAGAAGGGTTTGCAACACAGAACATGTTCATGGGTGGGATATAAAGCCAGTTAGATTCCAGCTATGGACTTCAGATGGACAGTATGTTGCATCACAGTGTTTTCTGAAAGGTCCGGGCAAATGGCGCTATTACCATGCCGGCGATTTTGTAGTTGAAGATGGTAATGTATCAACAAAAGTTAAATTCTCTATGACTCAAATTGATTGCACACATACTAAAGGTGGTCTCTGTTTAGATTCTGTTTTTGTGTATCCTAGTGAATTTAGAAAGGTTAAAGAATTTTTGAACTAA 954 0.3826 MCLNSFLQIYTTQDTLYRTEQQQHSTPIPATRSSELMGIRFSISSSQPSKPSLGELPESCVAVIMEYMDPPQICKLASLNRAFRAASSADFVWESKLPPNYHLIIRKIFDVSFPSHLEKRGIYSRLCSLNTFDGGTKKVWLDRSMGKLCLSISAKGLSITYIDDRRYWNHIPTEESTFSSVAYLQQIWWFEVDGEVEFPFPAGTYSLFFRIHLGKASKRFGRRVCNTEHVHGWDIKPVRFQLWTSDGQYVASQCFLKGPGKWRYYHAGDFVVEDGNVSTKVKFSMTQIDCTHTKGGLCLDSVFVYPSEFRKVKEFLN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2732 317 Pfam Phloem protein 2 148 306 IPR025886 -
Tpr5g2732 317 ProSiteProfiles F-box domain profile. 50 96 IPR001810 GO:0005515
Tpr5g2732 317 PANTHER F-BOX PROTEIN PP2-A15 41 314 - -
Tpr5g2732 317 PANTHER F-BOX PROTEIN PP2-A12 41 314 - -
Tpr5g2732 317 SUPERFAMILY F-box domain 44 111 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2732 Tpr-Chr5 49476358 49478321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2732 - - gmx:100788842 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2732 5 49476358 49478321 Tpr5g2732 5 49476358 49478321 ECH
Tpr5g2732 5 49476358 49478321 Tpr7g2194 7 28606985 28610469 ECH