Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2720 ATGTGTGGCACCATCATCATCACTGTCAAAAATAAATACAATAAAAAATGTGTGGCACCATCCATCCATCAATTAAGTCTCCGTGTACGTACGTTATATAGAAACTTTTCTCATCCCACAGAAAACCCAAAACAATCGAGAGAGAGAGAGAGCAGAGGCACAGATCTAGCAAACACCATTTCCATTCCTCTCGCTCCTCTCACTCCACATATCATGGGATTCCCAACTAACTCCGAAGACAAACCCCTCAAGTTCCTTATATACGGTCGCACCGGATGGATTGGCGGACTCTTAGGAACACTCTGTCGTGCTCAAGGTATCCAATTCGAATACGGATCGGGTCGACTCGAAAACCGATCCTCTTTGGAATCTGACATAGCCGAAATTAAACCTACTCATGTCTTTAACGCTGCTGGTGTTACTGGTAGACCTAACGTTGATTGGTGTGAGACTCATAAAGTTGAAACTATTCGTGCTAATGTTGTTGGAACTCTTACTCTTGCTGATGTTTGTCGTCAACGTGGAATTATTGTTATTAATTTTGCTACTGGTTGTATTTTTGAGTATGATTCTCAACATACTCTTGGATCTGGTATTGGTTTTAAGGAACAAGATGTTCCTAATTTCATTGGATCGTTTTACTCTAAGACTAAGGCTATGGTAGAGGATCTGCTGAGGAACTATGACAATGTATGTACATTGAGAGTGAGGATGCCAATTTCATCTGATTTAACCAACCCTCGCAATTTCATCACAAAGATCACTCGATATGAGAAGGTTGTCGATATTCCAAATTCGATGACCATTTTAGATGAACTTCTTCCAATCTCAATAGAGATGGCAAAGAGAAACCTCACTGGAATATGGAACTTCACAAATCCTGGAGTTGTTAGCCACAACGAAATCTTACAAATGTACAAAGACTATATCGATTCCAACTTTTCCTGGAAAAACTTCACTCTTGAGGAACAGGCGAAGGTGATTGTTGCTCCAAGAAGTAACAATGAACTTGACGCCGATAAATTGAAGAAAGAATTTCCAGAACTGTTGTCTATTAAGGAATCACTGATTAAGAATGTCTTCGAGCCTAATCAGAAGGTTAAAGCTTGA 1110 0.3991 MCGTIIITVKNKYNKKCVAPSIHQLSLRVRTLYRNFSHPTENPKQSRERESRGTDLANTISIPLAPLTPHIMGFPTNSEDKPLKFLIYGRTGWIGGLLGTLCRAQGIQFEYGSGRLENRSSLESDIAEIKPTHVFNAAGVTGRPNVDWCETHKVETIRANVVGTLTLADVCRQRGIIVINFATGCIFEYDSQHTLGSGIGFKEQDVPNFIGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLTNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILQMYKDYIDSNFSWKNFTLEEQAKVIVAPRSNNELDADKLKKEFPELLSIKESLIKNVFEPNQKVKA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2720 369 Pfam RmlD substrate binding domain 84 256 IPR029903 -
Tpr5g2720 369 Gene3D - 75 369 - -
Tpr5g2720 369 PANTHER BNAC05G13120D PROTEIN 79 365 - -
Tpr5g2720 369 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 79 365 - -
Tpr5g2720 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 356 IPR036291 -
Tpr5g2720 369 CDD dTDP_HR_like_SDR_e 84 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2720 Tpr-Chr5 49373180 49375321 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2720 K12451 - zju:107405251 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2720 5 49373180 49375321 Tpr5g2720 5 49373180 49375321 ECH