Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2697 ATGGCTGATCTATTTGCGTGGCTCTTCTCCTTCTTCGCCCTTATTGCCTTAATTGTACTCGTCATTTACCAGTTAATGTGCCTGGCAGACCTTGAATTTGATTATATAAATCCTTATGATTCTACATCTCGAATAAACAAAGTCGTTTTGCCTGAGTATATTACATTAGGTGTCCTTTGCTGCTTCTACCTTGTCACAGGACACTGGATAATGTCACTGTTCTGCGCTCCTTACGTCTACTATAATGTGAGATTGTATAGGCAAGGAAAGCATTTGGTTGATGTTACAGAGATATTCAACATGCTAGCTTCGGAAAAGAAGCAACGGCTGTTCAAACTCTTCTATCTAATATTTATCCTATTCCTCTCCTTGTTTTGGTTGATCTACACATCGTTGGACGATGATTATGATTAG 414 0.3889 MADLFAWLFSFFALIALIVLVIYQLMCLADLEFDYINPYDSTSRINKVVLPEYITLGVLCCFYLVTGHWIMSLFCAPYVYYNVRLYRQGKHLVDVTEIFNMLASEKKQRLFKLFYLIFILFLSLFWLIYTSLDDDYD* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2697 137 PANTHER CORNICHON-RELATED 1 135 - -
Tpr5g2697 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Tpr5g2697 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Tpr5g2697 137 PANTHER CORNICHON FAMILY PROTEIN 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2697 Tpr-Chr5 49174259 49177683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2697 K20368 - gmx:100799061 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2697 5 49174259 49177683 Tpr2g3809 2 40940546 40944179 PCT