Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2692 ATGGAGTGGTCAGCTTGTACGGATGAGTACGAGAAGCTTGTTTTTCGCATGAGCACTCCCAGGGTCGTCATTGACAATGCGGTTTGTTCCAATTCAACCATAGTGAAGTTTGATAGTGCCAGAAAGCATGGGATTCTTTTGGAAGCTGTACAAATTCTTAGCGATCTAAACCTTTTCATTAAGAAAGCATATGTTTCGTCCGATGGTAGATGGTTCATGGATGTTTTTCATGTTACGGATCAAAATGGAAACAAGTTAACCGATGAGAGCGTTTTAAAGTATATCGAACAGTCACTCAGTAGTATTCACAATGGAAAAACCAATCACAGAAATGGTCTCACTGCCTTGGAATTGAAGGGCACCGACCGTGTTGGTCTTCTTTCTGAGGTGTTTGCTGTATTGGCCGAGTTACAATGTGATGTGGTGGAGGCTAAAGTTTGGACTCACAATGGCCGAATTGCCTCCTTAATTTATGTTAAAGACTGCAACACTGGAACCTCTATTGAGGATTATCAGAAAATTAATAGGCTCGAAGCGCGCTTAAGATATGTTCTACAGGGAGATAGCGATGTTAGGAGTGCAACAACATCTCTCTCTGATGTTGTTATACATCCTGAAAGAAGGCTCCATCAGATGATGTTTGCAGATCGTGACTATCAGAAGAATCCTATTTTCGAGTTTACTTCTGAAACACCGTTGGTGACTGTCCAAAATTGGGCAGAAAGGGGCTATTCGGTTGTTAATGTTCAGTGCAAGGATAGAGTTAAGTTATTGTTTGATGTTGTGTGCAATTTGACAGACATGGAATATGTTGTGTTCCATGCAACTATCAACACAAGGATTGACCAAGCATATCTGGAATTTTACATAAGACATAAGGACGGCACTCCAATTAGTTCAGAACCGGAGCGTCAACGTGTGATTCAATGCTTACAAGCAGCAGTGGAGAGAAGATCATGTGAGGGTGTTAGGCTAGAGTTATCCACCGAAGACAGGCAAGGTCTTCTAGCCGAGGTAATGAGAACATTCCGAGAAAACGGGTTAAATGTAACTAGGGCCGACATAACCACCACAGGCGACTTGGCTGCAAATACTTTCTATGTAACAGATGCTATTGGATACACAGCCGACCAAAAAATCATCGAATCTGTTCGACAAAAAATCGGGCTAACCAATTTAAAAGTGAAGGAGTTGCCTTTCGTAAGTCACGAGAAGGCAGATAGGGAAGACCAATCTGTCGGAGTTGGCGGGGCAGTGTTATTGTCTCTTGGTAGCCTTGTGAGAAGGAATCTATACAATTTGGGTTTGATCAAATCTTTTTCTTAA 1326 0.4201 MEWSACTDEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSSDGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIHNGKTNHRNGLTALELKGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNTGTSIEDYQKINRLEARLRYVLQGDSDVRSATTSLSDVVIHPERRLHQMMFADRDYQKNPIFEFTSETPLVTVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRIDQAYLEFYIRHKDGTPISSEPERQRVIQCLQAAVERRSCEGVRLELSTEDRQGLLAEVMRTFRENGLNVTRADITTTGDLAANTFYVTDAIGYTADQKIIESVRQKIGLTNLKVKELPFVSHEKADREDQSVGVGGAVLLSLGSLVRRNLYNLGLIKSFS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2692 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Tpr5g2692 441 CDD ACT_ACR_3 244 318 - -
Tpr5g2692 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Tpr5g2692 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Tpr5g2692 441 Pfam ACT domain 324 382 IPR002912 -
Tpr5g2692 441 Pfam ACT domain 115 161 IPR002912 -
Tpr5g2692 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Tpr5g2692 441 SUPERFAMILY ACT-like 321 393 IPR045865 -
Tpr5g2692 441 CDD ACT_ACR_1 33 103 - -
Tpr5g2692 441 SUPERFAMILY ACT-like 111 184 IPR045865 -
Tpr5g2692 441 Gene3D - 322 394 - -
Tpr5g2692 441 Gene3D - 113 191 - -
Tpr5g2692 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2692 Tpr-Chr5 49146626 49149986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2692 - - gmx:100794729 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2692 5 49146626 49149986 Tpr5g2692 5 49146626 49149986 ECH