Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2678 ATGGCTTCATTTGGAAGTTTCTTCTTCTTTCTCATCAACATTTTCTTCCTTCTCACAATCTCTTCTGCAGAAGATGCATTTGTTCCTTATGAGTTTGAGGTTTCCTACATCACTGCCTCTCCTCTTGGAGTACCCCAACAGGTTATTGCTATCAATGGTGAGTTTCCAGGTCCTACTATTAATGTAACCACAAACAACAATGTTGCTGTTAATGTCCGAAACAAATTGGATGAGAATCTTCTTATTCATTGGTCTGGGGTTCAGCAAAGGAGGAGTTCATGGACAGATGGTGTTCTTGGAACAAATTGTCCTATTCCTCCTAAATGGAACTGGACTTATAATTTTCAAGTGAAGGATCAGATTGGAAGTTTTTTCTACTTTCCTTCACTTAATTTTCAAAGAGCAGCTGGTGGATTTGGTGGTTTCATCATAAACAATCGACCGGTCATTTCTGTTCCTTTTGATACTCCACAAGGAGACATTGTTGTTTTTATCGGTGATTGGTATACGCGCAATCACACGGATTTGAGAAAGGATCTGGATGATGGAAAAGATCTTGGCATGCCAAATGGTGTTCTCATCAATGGAAAAGGACCTTATAGATATAATGACACACTTGTTCCTGAGGGCATTGATTTTGAACAAATTGATGTTAAACCTGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTTTAGCAGAAACCGAGGGGTCATATACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGATAACCATGGATCAGAATGCAAGTTCAGATTACTACATTGTAGCAAGTGCCAGGTTTGTGAATGAATCCCGTTGGCAGAGAGTTACCGGAGTTGGTATCTTGCACTATACAAATTCCAAGGGGAAAGCTAAAGGTCATTTACCACCAGGTCCAGATGATCAATTTGACAAAACTTACTCGATGAACCAAGCAAGATCCATCAGATGGAACGTATCAGCAAGTGGTGCTCGTCCAAATCCACAAGGATCTTTCAGATACGGTTCAATCAATGTGACAGAGATTTATGTATTAAAAAATAAGCCACTAGTGAAAATTGGTGGAAAGCGGCGAGCAACACTTAGTGGAATCTCTTATACCAATCCTGCCACTCCACTCAGACTTGCTGACAAATACAAAGTAAAGGGAGTATACAAGCTTGATTTTCCTACAGAGCCTATAACTGGACCTCCTCGGGTAGAAACATCAGTAATCAATGGAAGTTTTAGAGGATTTATGGAAATTATACTGCAGAACAATGACACCAAGATGCATACCTATCACTTGAATGGATATGCATTTTTCGTAGTAGGGATGGACTTCGGTGATTGGTCTGAGAACAGCAGGGGCACATATAACAAGTGGGATGGAATAGCTCGTAGTACAGCACAGGTTTATCCTGGTGCATGGACAGCAGTTTTGGTCTCCCTCGACAACGTTGGAATTTGGAATCTAAGAACTGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATACATCAGGGTTGTCAATCCAGAGCCTACAAACAAGACCGAGCTTCCAATGCCAGATAATGCTCTTTTCTGCGGCGCCCTTCAACATATGCAAAAGCCTCAAAAAATTACCTCGGACGCGTCAATCAATGGAAATGGGCTGAAACTGTTATTCACTCTGGTGATGTTTGTTTGTGCCATAATCAACATTTTTCAGTAA 1776 0.4015 MASFGSFFFFLINIFFLLTISSAEDAFVPYEFEVSYITASPLGVPQQVIAINGEFPGPTINVTTNNNVAVNVRNKLDENLLIHWSGVQQRRSSWTDGVLGTNCPIPPKWNWTYNFQVKDQIGSFFYFPSLNFQRAAGGFGGFIINNRPVISVPFDTPQGDIVVFIGDWYTRNHTDLRKDLDDGKDLGMPNGVLINGKGPYRYNDTLVPEGIDFEQIDVKPGKTYRLRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLITMDQNASSDYYIVASARFVNESRWQRVTGVGILHYTNSKGKAKGHLPPGPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPLVKIGGKRRATLSGISYTNPATPLRLADKYKVKGVYKLDFPTEPITGPPRVETSVINGSFRGFMEIILQNNDTKMHTYHLNGYAFFVVGMDFGDWSENSRGTYNKWDGIARSTAQVYPGAWTAVLVSLDNVGIWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPMPDNALFCGALQHMQKPQKITSDASINGNGLKLLFTLVMFVCAIINIFQ* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2678 591 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 13 562 - -
Tpr5g2678 591 Gene3D - 19 146 IPR008972 -
Tpr5g2678 591 Pfam Multicopper oxidase 400 533 IPR011706 GO:0005507|GO:0016491
Tpr5g2678 591 SUPERFAMILY Cupredoxins 380 552 IPR008972 -
Tpr5g2678 591 PANTHER MULTI-COPPER OXIDASE 13 562 IPR045087 -
Tpr5g2678 591 SUPERFAMILY Cupredoxins 22 174 IPR008972 -
Tpr5g2678 591 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Tpr5g2678 591 Gene3D - 158 351 IPR008972 -
Tpr5g2678 591 Gene3D - 363 563 IPR008972 -
Tpr5g2678 591 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Tpr5g2678 591 Pfam Multicopper oxidase 161 313 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2678 Tpr-Chr5 48999536 49003457 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2678 - - gmx:100788318 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2678 5 48999536 49003457 Tpr5g2678 5 48999536 49003457 ECH