Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2669 ATGCGAGTTAAGGAAATGCACCCGTTGTGCTGCATCTCATTGGAGAGTCCAGGGATCGGAAGTCATTCACCAGAGCCAGACGCGGCGGCACTTTCAAGGACAAGGAGTTTACCGGCGAGTGGATCTGACCGCATTGGTCGCCGTGGATCAGAGGCAACAGTTGCCGGTGTTCTTTACAAGTGGACTAATTACGGTAAAGGATGGAGATCCCGATGGTTTCTCCTCCGCAATGGCGTACTTTCTTATGCTAAGATCCGGTGGCCGGAGAATCTCAATCTATTCTCTTCAATCGATGATGTTCGCTTAATCGGAGATGTAACTGCTAACCGTCTAGCTAGAATGGATAGAGACGCCGGAAACGCTGTTCGCCGGAAGAATCATAAACCTTCATCTTCTTCGTCTTCTTCTCCATCGGTGGTTCATCTGAAGATCTCATCGTTTAGAGAGAGCAAATCAGACGACAGAAAGTTCTATATATTTACAGCAACAAAGACACTTCATCTGAGAACTGATTCAAGGAAAGATCGTGTGGCATGGATACAAGCTTTGGTCTCAACTCGTAGTTTGTATCCACTAAGTGGTCATCATCTATTCCTTCCACCATATCAAATTTCTGTATCTACTGAGAGGCTTAAGAAACGATTGCTTGAAGAGGGTAGCAGTGAGAATCTTGTCAAGGAATGTGAGCAAATCATGCTTGCAGAGTTTTCTGAATTACAAGAACAGCTTAAAATTCTTTGTCAAGAAAGATCAAGTTTGTTTGATACCATTCGGCAGTTGGAGGCAGCTAACATTGAACCTGAGGGCTCTGCCTTGCATGACAGTGAATACCAATTAACAAAGAATGGATTTTCAAGTCTCGGCCGTGGAAAATATAGTGAATGCAGTACAACGGAATCATCTGACGATATTGAGAAACAAGAGGTAGAGGAAGTGTCAGAAGAAGATGAAATCTCATATTATGATACTAGAGACTATTTTACAGAACCTAGTTTTAGTTGTGGGTCAAAAGGAACTCTGGATCAGGTATCAAGGCGAAAAAAGCTTCCGGATCCCGTTGAGAAGGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAAGATAATGTGGGCAAAGATCTTACACGTGTTTGCCTTCCTGTATTCTTTAATGAGCCAATATCGTCTCTTCAGAAATGTTTTGAGGATTTGGAGTACTCTTATCTTCTAGATAGAGCTTATGAGCATGGAAAAAAGGGAAACAGTCTACTTCGGGCACTGAACGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCAGAAGGTCGTCATTGTAAGCCCTTTAATCCCTTGTTAGGGGAAACTTACGAGGCCGATTTTCCTGACAAAGGACTTCGTTTCTTTTCTGAGAAGGTTAGTCACCATCCAACTGTGGTTGCCTGCCATTGTGAAGGTAGAGGATGGAGGTTTTGGGCAGACAGTAATATCCATTCGAAGTTTTGGGGACGGTCAATTCAGCTCGACCCAGTTGGAGTTCTGACCCTTGAATTTGATGATGGCGAAATATTTCAGTGGAGCAAGGTTACGACAACAATTTATAATCTTATCCTTGGCAAACTGTATTGTGATCATCATGGGAATATGGAAATTCGTGGTAATCGCCAATATTCTTGCAAGCTGAAGTTCAAAGAGCAGACGATTCTTGACCGAAATCCTCGACAGGTAAATGGATTTGTTGAAGATAAAATGGGAAAAAAAGCAGCCACATTATTTGGCAAGTGGGATGATAGTATATATTATTTTGATGGTGATGTGAATGTCAAGCATAAAGATTACACTTCGTCAAATGGAACCTTGTTGTGGAAAAGGACTAAGCCACCACCAAATTTGACTCGGTACAATTTGACATCATTTGCCATCACACTGAATGAGCTTACACCAGGACTAAAGGAGAAGCTTCCGCCCACGGATTCCAGACTGAGACCTGATCAGCGGCATTTAGAGAATGGGGAATACGAGAAGGCTAATATGGAGAAACAAAGATTGGAAAAGAGGCAAAGAATGTCGAGGAAAATGCAAGAAAATGGCTGGGAGCCTAGGTGGTTTCGCAAAGAAGGTGAAAATGGAACGTTTCGATATACTGGCGGGTATTGGGAAGCAAGAGCTGTAGGAACATGGAATGGATGCCCAAATATATTTGGTGAATTTCAAGAAAGCATCACTGATACTTTTGATGCCTCTTGA 2220 0.4261 MRVKEMHPLCCISLESPGIGSHSPEPDAAALSRTRSLPASGSDRIGRRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRWPENLNLFSSIDDVRLIGDVTANRLARMDRDAGNAVRRKNHKPSSSSSSSPSVVHLKISSFRESKSDDRKFYIFTATKTLHLRTDSRKDRVAWIQALVSTRSLYPLSGHHLFLPPYQISVSTERLKKRLLEEGSSENLVKECEQIMLAEFSELQEQLKILCQERSSLFDTIRQLEAANIEPEGSALHDSEYQLTKNGFSSLGRGKYSECSTTESSDDIEKQEVEEVSEEDEISYYDTRDYFTEPSFSCGSKGTLDQVSRRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVFFNEPISSLQKCFEDLEYSYLLDRAYEHGKKGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGLRFFSEKVSHHPTVVACHCEGRGWRFWADSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKLYCDHHGNMEIRGNRQYSCKLKFKEQTILDRNPRQVNGFVEDKMGKKAATLFGKWDDSIYYFDGDVNVKHKDYTSSNGTLLWKRTKPPPNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWEPRWFRKEGENGTFRYTGGYWEARAVGTWNGCPNIFGEFQESITDTFDAS* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2669 739 SMART PH_update 52 190 IPR001849 -
Tpr5g2669 739 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 130 730 IPR000648 GO:0008289
Tpr5g2669 739 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 115 IPR000648 GO:0008289
Tpr5g2669 739 Gene3D - 656 714 - -
Tpr5g2669 739 ProSiteProfiles PH domain profile. 51 188 IPR001849 -
Tpr5g2669 739 PANTHER BNAC03G64980D PROTEIN 130 730 - -
Tpr5g2669 739 PANTHER BNAC03G64980D PROTEIN 4 115 - -
Tpr5g2669 739 MobiDBLite consensus disorder prediction 294 315 - -
Tpr5g2669 739 SUPERFAMILY Oxysterol-binding protein-like 355 734 IPR037239 -
Tpr5g2669 739 Coils Coil 657 686 - -
Tpr5g2669 739 MobiDBLite consensus disorder prediction 117 137 - -
Tpr5g2669 739 Gene3D - 48 189 IPR011993 -
Tpr5g2669 739 SUPERFAMILY PH domain-like 51 185 - -
Tpr5g2669 739 MobiDBLite consensus disorder prediction 20 45 - -
Tpr5g2669 739 Pfam Pleckstrin homology domain 56 183 - -
Tpr5g2669 739 Pfam Oxysterol-binding protein 360 713 IPR000648 GO:0008289
Tpr5g2669 739 Gene3D - 446 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2669 Tpr-Chr5 48852049 48862737 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2669 K20456 - tcc:18606296 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2669 5 48852049 48862737 Tpr5g2669 5 48852049 48862737 ECH