Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2668 ATGAGTACTCTCCCTCAAACTCAGGATCAAACCATTCAAGATGCATGGGACTATAAGGGTAGTCCAGCTGAAAGGTCCAAAACTGGTGGTTGGGCATCATCTGCAATGATTTTAGGAGTAGAAGCATGTGAGAGGTTAACAACAATGGGCATAGCTGTAAATTTGGTGACATATTTAACTGGTACTATGCATTTAGGAAATGCTTCCTCTGCTAATATAGTAACCAATTTCATGGGAACCTGTTTTATGCTCTGTTTACTTGGTGGTTTTGTAGCCGACACTTTTATTGGAAGATACCTCACCATAGCCATCTTTGCAACTGTTGAAGCAATTGGTGTGACAATCTTGACAATATCAACAATAATTCCAAGCCTCCATCCACCAAAATGCACACATAACAATCTCAAATCATGCGAACCAGCAAACAACACTCAACTAACAGTTCTATACTTAGCTCTATACGTAACAGCACTTGGAATCGGAGGTTTAAAATCAAGTGTTTCTGGTTTTGGTTCCGACCAATTCGACGATTCAAACGAAGTTGAAAAAAATCATATGGTGAAATTCTTCAACTGGTTTTTCTTTTTCATAAGTATTGGTTCATTAACAGCAGTGACAATTCTTGTTTACATTCAAGATCATGTTGGAAGAGATTGGGGTTATGGAATTTGTGTTTGTGCTATTGTTGTTGCACTTTGTGTGTTCTTGTGGGGAACAAAAAGGTATAGGTTTAAGAAACTTGTTGGGAGTCCTTTGACTCAAATTGCGGTGGTTTATGTTGCGGCGTGGAGGAAAAGGAAGCTGAAATTGCCGTTAGATTCGTCGTCGTTGTATAATTTGGATGATGTTGAAGATGAAATGGTGAGGAAGAAGAAACAAATGTTGCCACATAGCAAACAATTTCGATTTTTGGACAAGGCAGCAATCAAGGACCCAAAAACAGATGGTAATGAAATCAATGTACCAAAAAAATGGTCTCTATCAACCTTAACAGATGTTGAAGAAGTAAAATTAGTCCTAAGAATGTTACCAATATGGGCTACAACAATAATGTTTTGGACAGTATATGCACAAATGACAACATTTTCAGTATCACAAGCAACAACATTAAACCGTCACATAGGAAAATCCTTTCAAATCCCACCAGCATCACTCACTGCATTCTTCATTGGTAGCATCCTCTTAACAATCCCAATTTATGATCGTCTCATCGTTCCTATAACAAGAAAAATCTTCAAAAACCCACAAGGATTAACCCCTTTACAAAGAATTGGAGTTGGTTTAGTTTTTTCAATTTTTGCAATGGTTGCAGCTGCACTCACTGAACTAAAACGTATGAAAATGGCACATTTACATAATTTGACACATGATCCTCATTCGGAGATTCCTATGAGTGTGTTTTGGTTGGTCCCACAATTCTTTTTTGTGGGGTCAGGTGAAGCATTTACTTATATAGGACAATTGGATTTTTTCTTAAGGGAATGTCCTAAAGGGATGAAGACTATGAGTACAGGGTTGTTTTTGAGTACATTGTCTTTGGGATTTTTCTTTAGTTCATTGTTGGTTACTTTGGTTCATAAAGTGACAGGTCAGCATAAGCCATGGCTTGCAGATAATCTTAATCAAGGGAAACTCTATGACTTCTATTGGCTTTTGGCTTTGTTGAGTTGTGTGAATTTGGTTATATACTTGATTTGTGCTAATTGGTATGTTTATAAGGATAAAAGACTAGCTGATGAAGGTATAGAATTAGAGGATGCAGATACAGCTTATCATGCATAG 1782 0.3721 MSTLPQTQDQTIQDAWDYKGSPAERSKTGGWASSAMILGVEACERLTTMGIAVNLVTYLTGTMHLGNASSANIVTNFMGTCFMLCLLGGFVADTFIGRYLTIAIFATVEAIGVTILTISTIIPSLHPPKCTHNNLKSCEPANNTQLTVLYLALYVTALGIGGLKSSVSGFGSDQFDDSNEVEKNHMVKFFNWFFFFISIGSLTAVTILVYIQDHVGRDWGYGICVCAIVVALCVFLWGTKRYRFKKLVGSPLTQIAVVYVAAWRKRKLKLPLDSSSLYNLDDVEDEMVRKKKQMLPHSKQFRFLDKAAIKDPKTDGNEINVPKKWSLSTLTDVEEVKLVLRMLPIWATTIMFWTVYAQMTTFSVSQATTLNRHIGKSFQIPPASLTAFFIGSILLTIPIYDRLIVPITRKIFKNPQGLTPLQRIGVGLVFSIFAMVAAALTELKRMKMAHLHNLTHDPHSEIPMSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFFSSLLVTLVHKVTGQHKPWLADNLNQGKLYDFYWLLALLSCVNLVIYLICANWYVYKDKRLADEGIELEDADTAYHA* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2668 593 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Tpr5g2668 593 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 585 - -
Tpr5g2668 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 585 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr5g2668 593 Pfam POT family 99 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr5g2668 593 SUPERFAMILY MFS general substrate transporter 19 574 IPR036259 -
Tpr5g2668 593 Gene3D MFS general substrate transporter like domains 4 580 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2668 Tpr-Chr5 48839240 48847578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2668 3 586 Organic Solute Cotransporters AT1G12110 63.993 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2668 - - pvu:PHAVU_003G218500g 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2668 5 48839240 48847578 Tpr5g2668 5 48839240 48847578 ECH
Tpr2g3783 2 40767888 40771032 Tpr5g2668 5 48839240 48847578 PCT