Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2667 ATGGCTTCTAAAACCTCTTCCTCCCTTGCTATTTTCCTCACAATCAACATTCTCTTCTTTACACTCGTCTCTTCTTGCGGGACATGCGGCTCTGGCCCATACCCAAACCCTAACCCAAAGCCAAAACACACGCCAAGCCCAAAACATTCCGGTGGCTCGAGCCATTCAGGTGGAGGATCAAGCCATTCAGGCGGGGGATCTAGCCCTTCTGGAGGCTCAACCCCCTCTGGAGGCTACACTCCACCTGGTGGCTCCACCCCTTCAGGCGGCAGTGGAACCGTCACATGCCCACGCGATGCACTGAAACTCGGTGTATGTGCCAATGTTTTAAATGGATTGTTGAATGTAACTTTGGGCCAGCCACCAGTGACACCATGTTGCTCACTCCTAAATGGACTTGTTGATCTTGAGGCTGCAGTGTGTCTTTGCACTGCCCTTAGAGCTAACATTTTGGGGATAAATCTTAACCTTCCTATCTCACTTAGCTTACTTCTCAATATTTGCTCAAGGGAAGCACCACGTGATTTCCAATGCTCCTAA 540 0.5 MASKTSSSLAIFLTINILFFTLVSSCGTCGSGPYPNPNPKPKHTPSPKHSGGSSHSGGGSSHSGGGSSPSGGSTPSGGYTPPGGSTPSGGSGTVTCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLNGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNICSREAPRDFQCS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2667 179 MobiDBLite consensus disorder prediction 47 76 - -
Tpr5g2667 179 CDD HPS_like 95 178 IPR027923 -
Tpr5g2667 179 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Tpr5g2667 179 Pfam Hydrophobic seed protein 95 179 IPR027923 -
Tpr5g2667 179 Gene3D - 94 179 IPR036312 -
Tpr5g2667 179 MobiDBLite consensus disorder prediction 38 76 - -
Tpr5g2667 179 SMART aai_6 96 178 IPR016140 -
Tpr5g2667 179 PANTHER - 7 51 - -
Tpr5g2667 179 PANTHER - 83 179 - -
Tpr5g2667 179 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 98 178 IPR036312 -
Tpr5g2667 179 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 51 - -
Tpr5g2667 179 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 83 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2667 Tpr-Chr5 48826740 48827670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2667 86 178 Acyl Lipid Metabolism Gene Families AT4G22490 40.860 1.55e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2667 - - gsj:114392549 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2667 5 48826740 48827670 Tpr5g2667 5 48826740 48827670 ECH