Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2665 ATGGCTTCCAAAACTTGTTCCACTCTTGCTATTTTCCTCACAATCAACCTCCTATTTTTTTCACTTGTTTCAGCTTGCGGTTACCAATGCAACCCTACACCAAACCCAAGCCCAAAACCAAAGCCAAATCCAAATCCTAACCCAACCCCTTCAAGTGGATCATGCCCACGTGATGCACTCAAACTTGGTGTATGTGCCAATGTCCTAAATGGATTGTTGAATATAACATTAGGTCACCCACCAGTGACCCCTTGTTGTTCCCTTCTAAATGGCCTTGTTGATCTTGAAGCTGCAGCATGTCTTTGCACTGCCCTTAAAGCTAACATTTTGGGCATTAATCTTAATCTTCCAATTTCACTTAGCTTGCTTCTCAATGTTTGTTCAAGGAAAGTCCCACGTGATTTCCAATGTGCCTATTAA 420 0.4214 MASKTCSTLAIFLTINLLFFSLVSACGYQCNPTPNPSPKPKPNPNPNPTPSSGSCPRDALKLGVCANVLNGLLNITLGHPPVTPCCSLLNGLVDLEAAACLCTALKANILGINLNLPISLSLLLNVCSRKVPRDFQCAY* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2665 139 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 8 138 - -
Tpr5g2665 139 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Tpr5g2665 139 PANTHER - 8 138 - -
Tpr5g2665 139 MobiDBLite consensus disorder prediction 35 55 - -
Tpr5g2665 139 CDD HPS_like 53 137 IPR027923 -
Tpr5g2665 139 MobiDBLite consensus disorder prediction 35 51 - -
Tpr5g2665 139 Gene3D - 53 138 IPR036312 -
Tpr5g2665 139 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 57 137 IPR036312 -
Tpr5g2665 139 Pfam Hydrophobic seed protein 55 138 IPR027923 -
Tpr5g2665 139 SMART aai_6 55 137 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2665 Tpr-Chr5 48813216 48813976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2665 45 137 Acyl Lipid Metabolism Gene Families AT4G22490 40.860 1.57e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2665 - - gmx:100801985 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2665 5 48813216 48813976 Tpr5g2665 5 48813216 48813976 ECH