Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2663 ATGTTATCATCAAAAGCAAAAGCTTTGTTTTTCATTTTTAAGATATTGATGTTGAATGTCATAACACATGCATGTGGTCCATGCATTCAACCAAATCCACCACCTTATCACAACAAACCAAGTCATCCAAAACATCCACCGCATCACCACCACGGCGGCGGAGGTGGAGGAAAACAGCCAGTAGTATCCCCTCCTCCTGTGGTTGTCGTGCCGCCGATTATTGTCACACCACCACTTCAACCACCGCCGACGATTATATATCCACCACCAACAACTCCTGTTTTTCCTCCACCAACTACTCAACCAACTTGTCCAATTGATGCACTCAAGCTAGGGCTTTGTTTGGATGTACTTGGAGGACTTATTCATGTTGGAATTGGTAACCCTGTTGAGAATGTGTGTTGTCCTGTTATTCAAGGGTTGGTTGATCTTGAAGCTGCAATTTGTCTTTGTACTGTTATTAGGGCTAAGGTTCTTAATCTTAATATTTATCTTCCTCTTGCTCTTCAAGTTTTGGTCACTTGTGGGAAGACTCCTCCTCGTGGTTTTGTTTGTCCACCTCTCTATAATTAA 573 0.4258 MLSSKAKALFFIFKILMLNVITHACGPCIQPNPPPYHNKPSHPKHPPHHHHGGGGGGKQPVVSPPPVVVVPPIIVTPPLQPPPTIIYPPPTTPVFPPPTTQPTCPIDALKLGLCLDVLGGLIHVGIGNPVENVCCPVIQGLVDLEAAICLCTVIRAKVLNLNIYLPLALQVLVTCGKTPPRGFVCPPLYN* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2663 190 Pfam Hydrophobic seed protein 103 186 IPR027923 -
Tpr5g2663 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 106 187 IPR036312 -
Tpr5g2663 190 SMART aai_6 104 185 IPR016140 -
Tpr5g2663 190 PANTHER - 4 187 - -
Tpr5g2663 190 CDD HPS_like 106 185 IPR027923 -
Tpr5g2663 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 4 187 - -
Tpr5g2663 190 Gene3D - 100 187 IPR036312 -
Tpr5g2663 190 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2663 Tpr-Chr5 48806074 48807162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2663 96 187 Acyl Lipid Metabolism Gene Families AT4G22490 35.484 2.97e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2663 - - ming:122069737 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2663 5 48806074 48807162 Tpr5g2663 5 48806074 48807162 ECH