Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2662 ATGGCTTCCAATCTTGCTATTCTCCTAGCCCTCAACCTCATTTTTTTCACCGTTGTAACAGCCAATTATGTTCCATGTCCTCCACCACCCCCAAAAGGTCACCACCACCACCACCACTCGCATCCACCTTCCACAAATTATCCAACATGTCCTAGAGACACAATTAAGTTTGGTGTGTGTGCTGATGTATTAGGTTTGATTAACGTTGAACTTGGTAAGCCACCAAAGACACCATGTTGTTCTCTCATTGATGGTCTTGCTAATCTTGAAGCTGCTGTGTGTCTTTGCACTGCTCTTAAGGCTAATGTCTTAGGCATTAACCTTAACCTTCCAATTAATTTGAGCTTGGTACTTAACTATTGTGGAAAGGGAGTTCCAAAGGGGTTCGTTTGTGCTTAA 399 0.4286 MASNLAILLALNLIFFTVVTANYVPCPPPPPKGHHHHHHSHPPSTNYPTCPRDTIKFGVCADVLGLINVELGKPPKTPCCSLIDGLANLEAAVCLCTALKANVLGINLNLPINLSLVLNYCGKGVPKGFVCA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2662 132 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 132 - -
Tpr5g2662 132 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 131 IPR036312 -
Tpr5g2662 132 Pfam Hydrophobic seed protein 49 132 IPR027923 -
Tpr5g2662 132 Gene3D - 48 132 IPR036312 -
Tpr5g2662 132 SMART aai_6 50 131 IPR016140 -
Tpr5g2662 132 PANTHER - 2 132 - -
Tpr5g2662 132 CDD HPS_like 48 131 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2662 Tpr-Chr5 48802556 48803312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2662 39 131 Acyl Lipid Metabolism Gene Families AT4G22490 35.789 9.72e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2662 - - gmx:100500229 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2662 5 48802556 48803312 Tpr5g2662 5 48802556 48803312 ECH