Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2654 ATGGGAACTCGATCAAATTTGTACAAGAACCCTTCAATAACCTACAACAAACATTTCAGTCTCTCTTCCGTTCTTCAGAATCTTCACGCTTACAACATCGCCACCGGCAATGTTACTTCCGACGACCAACCGCCTCCCGCTCCAACCACCTCCCACAAACGTCGCCGTCCTCTCCGGCCACCGCAATCTCGTCACAATCATAACAATGAAGTTGACGATGATCCATCCTCTATGTCCCACCACGATTACATTCTAAAGAGAAGGAAAGAAGTTGATTCGTCTAAGAATCCTGAACGTGTTGAATTGACTGAAGATGTATTGGGAAACCCTAATTCTGCTATCTCCTTGGTGGATTATGCAAGTGATGAAAGTGCTTCTTCAGAGTGTGAAGAAACTCATACTGATACTCTTCCAAAGTCTGGTCACAAAGAAGAATTAAATGGAGTCAAAAGTAGAAATGAGCAGCGTTTTCCTGTATCAGGGGAACCTGTTTGTCTTATATGTGGAAGATACGGTGAATATATATGCAACGAGACGGATGATGATGTCTGTAGCATGGAGTGCAAAAATGAACTTTTGGAAATTCTTAAACTCAATGAGGGATCCTCCCATGACCAAGCTAAAGATTTCTCCTCATCTGGAATTAGTTATGCCTTACCGGCTCCTGTCTTTAGTGATGATACCTGGGATTATAATCGACATCGCTGGTCAAAAAAGAGATCTAGCCTTTCTACTTATGAATGTTGGAAATGTCAAAGACCTGGGCACTTAGCAGAAGATTGTCTAGTAAAGAGTAGCAACGAGATCACAGTGGGAAGAAGTAATAGATCTAGCTCCATTCCAAAGGATCTTCTTGGACTGTATAGAAGATGCCACCAGCTTGGTAAAGACTTGTTGGCTGCAAACTGTAATATATGCCGCAGCTCATCGAATTTGGCTACATGCATCGATTGTAGTATTGTTCTTTGTGATGGGGCTGGTCACTTGGATGATCATATAAGAACACACCCTTCCCATGAAAAATATTACTCACACAAGCTAAAACGTCTGGTTAAATGCTGCAAGTCAACTTGCAAGGTCACTGACATCAAGGATCTCTTGGTTTGTCACTATTGCTTTGATAAAGCCTTTGAAAAGTTCTATGACATGTATACAGCAACATGGAAAGGAGCTGGGTTTTCGATTATATGTGGTTCTATATGCTGTGAAGATCACTTCACGTGGCACAGGATGAATTGTTTGAATGCAGGTGTGGAAGAAAGTGCGTCTATTGTAAAAAGCAATGGCTATGAAGGCAAACGTACGCAACTTAGTGATTTTATTTTTTGA 1329 0.4146 MGTRSNLYKNPSITYNKHFSLSSVLQNLHAYNIATGNVTSDDQPPPAPTTSHKRRRPLRPPQSRHNHNNEVDDDPSSMSHHDYILKRRKEVDSSKNPERVELTEDVLGNPNSAISLVDYASDESASSECEETHTDTLPKSGHKEELNGVKSRNEQRFPVSGEPVCLICGRYGEYICNETDDDVCSMECKNELLEILKLNEGSSHDQAKDFSSSGISYALPAPVFSDDTWDYNRHRWSKKRSSLSTYECWKCQRPGHLAEDCLVKSSNEITVGRSNRSSSIPKDLLGLYRRCHQLGKDLLAANCNICRSSSNLATCIDCSIVLCDGAGHLDDHIRTHPSHEKYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKGAGFSIICGSICCEDHFTWHRMNCLNAGVEESASIVKSNGYEGKRTQLSDFIF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2654 442 Gene3D - 241 289 - -
Tpr5g2654 442 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 442 - -
Tpr5g2654 442 MobiDBLite consensus disorder prediction 63 102 - -
Tpr5g2654 442 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 442 - -
Tpr5g2654 442 SUPERFAMILY Retrovirus zinc finger-like domains 231 261 IPR036875 GO:0003676|GO:0008270
Tpr5g2654 442 MobiDBLite consensus disorder prediction 130 151 - -
Tpr5g2654 442 MobiDBLite consensus disorder prediction 36 107 - -
Tpr5g2654 442 MobiDBLite consensus disorder prediction 130 154 - -
Tpr5g2654 442 ProSiteProfiles Zinc finger CCHC-type profile. 248 261 IPR001878 GO:0003676|GO:0008270
Tpr5g2654 442 Gene3D - 146 203 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2654 - - gmx:100814892 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2654 5 48701975 48710133 Tpr5g2654 5 48701975 48710133 ECH