Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2584 ATGTACAAAGAAAAAGAAAGAGGCGTTTCTGCTTCCAAATCGGAAGATCGGAAACGAATCAACGATGTTCTCGATAAACAACTCGAACGATCTTCTCCTTCAACTTCTCGTCCCATCAATGGAAAACATGGCAAAGAAAGAGAAACCACCAGTAACATCAAGGATCCTCGTTTGGCTTCCGCTTCCAAAACTTCCAATATCTCTGAGGAATCTGAAACAGACAGTGAAGAATCGGATGTGAGTGGTTCTGATGGAGAAGACACATCTTGGATCTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGTGAGGTTGATGATGATTACATTCAAGATGATTTCAACCTTTGTGGATTAAGCAGCCAAGTGCCTTACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCCCATGGCGATATGTTCACAGAGGAGCAAAATGAGTTAATTGAATCGGCAGCAGAGATGCTTTATGGTATGATTCATGCACGATACATACTGACAAGCAAAGGAATGGCTGCCATGCTTGACAAGTACAAGAGCTATGATTTTGGCAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGCCTTCCAGTTGGTCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGTCCTAGGTGTGAGGATCTTTATTATCCTCGGTCCAAGTATCAAGGCAACATCGATGGAGCTTATTTTGGAACAACATTCCCACACCTCTTCTTGATGACATATGGACAACTGAAGCCACAGAAACCATCTCAGGGCTATGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA 831 0.4212 MYKEKERGVSASKSEDRKRINDVLDKQLERSSPSTSRPINGKHGKERETTSNIKDPRLASASKTSNISEESETDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKSYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQGYVPRVFGFKLHKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2584 276 MobiDBLite consensus disorder prediction 1 83 - -
Tpr5g2584 276 Pfam Casein kinase II regulatory subunit 89 272 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 82 186 IPR016149 GO:0005956|GO:0019887
Tpr5g2584 276 PANTHER CASEIN KINASE II SUBUNIT BETA 1 275 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 MobiDBLite consensus disorder prediction 1 26 - -
Tpr5g2584 276 PRINTS Casein kinase II regulatory subunit family signature 89 105 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 PRINTS Casein kinase II regulatory subunit family signature 106 120 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 PRINTS Casein kinase II regulatory subunit family signature 161 182 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 PRINTS Casein kinase II regulatory subunit family signature 186 207 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 PRINTS Casein kinase II regulatory subunit family signature 208 229 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 PRINTS Casein kinase II regulatory subunit family signature 236 253 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 Gene3D - 187 261 - -
Tpr5g2584 276 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 275 - -
Tpr5g2584 276 SUPERFAMILY Casein kinase II beta subunit 87 275 IPR035991 GO:0005956|GO:0019887
Tpr5g2584 276 ProSitePatterns Casein kinase II regulatory subunit signature. 190 221 IPR000704 GO:0005956|GO:0019887
Tpr5g2584 276 MobiDBLite consensus disorder prediction 54 68 - -
Tpr5g2584 276 SMART CK_II_beta_2 89 272 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2584 Tpr-Chr5 47850509 47854295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2584 K03115 - gmx:100784848 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2584 5 47850509 47854295 Tpr5g2584 5 47850509 47854295 ECH
Tpr2g5570 2 64414958 64418354 Tpr5g2584 5 47850509 47854295 PCT