Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2581 ATGGTGCTTCCTTTCACCAAATTCATTCTATTACAAAACCCCTTTCTCAAAAAGGTTCCACCTTTGCAAAAATTTCTTTGTGGGCATGTCTATTTCCACCAATTGAATCCATATTCGCAAAAAATTTCAACTTTTGAAAACTGTGAGAGATTATCATGGGAACGTTCAACACAAGAAATTTTATTGGGTAAGCTTAAATTTGCTTTGAGGAATAATCAATTACAAGAAGCATTGGAAACTTTTCGTGATTTTAGAAAGCTTTATGGTTACCCTGAGGTTAATTTATTGAATCAGCTTATTGTTCAGTTGTGTTATTCTTGTAATCATGTTTGGGTGAGAAAATCATGTGATTTAGCTTTGAAAATTGTTGAAGAGAATTTTGGTTTGATTCATGTTGATACATTAACAAAACTTGCTTTGTCATTAGCTAGAATGCAAATGGCGTCTCCGGCTTCGGTTGTACTTAGGTTGATGCTTGATAAAGGGTTTGTGCCATCTATGAATTTATTGTCCTTGATTGTTTTTCATATTGTGAAGACAGAAATTGGAACTTATCTTGTATCTACTTATTTGTATCAAGTTTGTGAGTTCTATAATAGTTTGAAGGATAAAAAAGCTCAATGTGCGGTTTTGTTGAAGCCGGATACTTTGATATTTAATCTTGTTCTTGATGCTTGTGTGAGGTTTAAGTTGTGTTTGAAAGGCTTGTGTCTGATTGAGTTAATGGCTCTGACCGGGACAGTGGCTGATGCACACTCGATTGTGATAATTTCGCAGATTTTAGAGATGAATGGTTTGAGAGATGAAATGATGGAATTAAAATGTCATATTGATGGAGTTTCGGCTGCTTATGTTCGGCATTATCGTCAGTTCTATGATAGTTTGTTGAGCTTGCACTTTAAATTTAACGACGTTGATGCTGCGGCTAAGCTTGTTTTGGATATGAATAGCTCACATAGTCACAATAATTTAGAATGTAGGTACCACTTACAAAAACCATGCTTTATTGCTGTTGGATCGCCTAATCTTAAGAATGCATTAAAGATACATATAGAGCCTGAACTACTGCAGAAGGACTCTGTGCTTAAATTGGAAGGTAGAGAAGGTCTTGTTTTTTATAGGGGTGGGAAACTTGTTCTTAGTAATAGAGCTTTGGCTAAGTTGATCATTGGTTACAAGAAAGACAGTAGAATTAGTGAACTTTCAAAACTTTTACTTAGCATTCAAGGGGAACAATATTCAGTGGCAGGATCCAGTTTGTCTTCTGATGTGATTAGGGCTTGCATTAAGATGGGATGGCTTGAGTCTGCTCATGACATTTTGGATGACTTAGAGGCTGTCGAGTCTCCAATCGGCCGCGACATGTATATGTTACTGTTATCAGCATATCAGAAGGAGGGAATGCAAAGAGAAGCTAAGGCACTGCTTAAACAAATGAAAAAGATTAATTTGTACAAAGAATTGTCTGATGATGCTATTGATAAACACACTCTTTATGAAGAAAATTCAAATTTGGTTGGTAAATCAGATTTGTCTGTCGCCTTGGCTCAAGTGTTGAAAGATGAAAATCAGACCGATATTCCTTTGGTGTATAACTTCAATTCTTCGATCTTCTTTTTCTGCAAGGCAAGAATGATGGATGATGCACTGAGAGCATATAGAAGAATGTGTGAAATGAAAATTCAACCGACAAACCAAACTTTTGCTCATCTCGTGCGTGGATATTATTCTCTTGGTATGTATCGCGAGATTACATACTTGTGGGGAGACATCAAGAGATTCATGAAGAACAGCTATTTGGTTGTAGATAGAGATCTATACGAATTACTGCTGCTAAATTTCATTCAAGGTGGTTACTTTGAGAGAGTGATGGAGGTAATTGGCCATATGAATGACCGTAACATGTATACCAACAAGTTGATGTACAAAAGTGAGTTCCTTAGACTTCATAAGAATCTTTATAGGAGTTTAAAAGCATCAGATACAAGAACAGAAGCACAAAGCAAAAGGCTTGAGCATGTTCAGGAATTTAGGAAATGGGCTGGTATTGATTAA 2055 0.3611 MVLPFTKFILLQNPFLKKVPPLQKFLCGHVYFHQLNPYSQKISTFENCERLSWERSTQEILLGKLKFALRNNQLQEALETFRDFRKLYGYPEVNLLNQLIVQLCYSCNHVWVRKSCDLALKIVEENFGLIHVDTLTKLALSLARMQMASPASVVLRLMLDKGFVPSMNLLSLIVFHIVKTEIGTYLVSTYLYQVCEFYNSLKDKKAQCAVLLKPDTLIFNLVLDACVRFKLCLKGLCLIELMALTGTVADAHSIVIISQILEMNGLRDEMMELKCHIDGVSAAYVRHYRQFYDSLLSLHFKFNDVDAAAKLVLDMNSSHSHNNLECRYHLQKPCFIAVGSPNLKNALKIHIEPELLQKDSVLKLEGREGLVFYRGGKLVLSNRALAKLIIGYKKDSRISELSKLLLSIQGEQYSVAGSSLSSDVIRACIKMGWLESAHDILDDLEAVESPIGRDMYMLLLSAYQKEGMQREAKALLKQMKKINLYKELSDDAIDKHTLYEENSNLVGKSDLSVALAQVLKDENQTDIPLVYNFNSSIFFFCKARMMDDALRAYRRMCEMKIQPTNQTFAHLVRGYYSLGMYREITYLWGDIKRFMKNSYLVVDRDLYELLLLNFIQGGYFERVMEVIGHMNDRNMYTNKLMYKSEFLRLHKNLYRSLKASDTRTEAQSKRLEHVQEFRKWAGID* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2581 684 PANTHER OS07G0495300 PROTEIN 28 684 - -
Tpr5g2581 684 PANTHER BNAC05G43320D PROTEIN 28 684 - -
Tpr5g2581 684 Gene3D Tetratricopeptide repeat domain 59 336 IPR011990 GO:0005515
Tpr5g2581 684 Gene3D Tetratricopeptide repeat domain 421 682 IPR011990 GO:0005515
Tpr5g2581 684 Pfam PPR repeat 455 483 IPR002885 -
Tpr5g2581 684 Pfam PPR repeat 539 560 IPR002885 -
Tpr5g2581 684 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 529 563 IPR002885 -
Tpr5g2581 684 TIGRFAM PPR: pentatricopeptide repeat domain 540 564 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2581 Tpr-Chr5 47824180 47827708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2581 422 642 Glycosyltransferase AT1G05670 22.124 1.56e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2581 - - cam:101501642 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2581 5 47824180 47827708 Tpr5g2581 5 47824180 47827708 ECH