Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2570 ATGGAGGTTGCAACCGCAAACGCAGCGTTTACCTTCGCCGTCAACAAACCCTTGTTCGTTTCTCCATCTTCATCACGAACCACAAGCTCTATCAGACCCATCAAATCCTCTTTCAGAAACTCTATCTCCACCGATTTCGTTGCTCCTTCCACTGCAATCACCTCTTCTTCCTCTAGTCATTTCTCCGGCCACAAGCTCCGACCTCCATGCCTCAATCCGGCGTCGTTTCGAACTTCTGGCGGTAAAAGAGGCGTTGTTACTATGGTTATTCCTTTCAAAAGAGGGAATGCGAGGGAGCAACCTCCACCAGACTTAGCTTCTTACTTGTTCAAAAATCGAATTATTTACTTGGGCATGCCTCTTATTCCATCCGTCACAGAGTTGATGATTGCTGAATTTCTCTACCTTCAAAATGACGATCCAACAAAACCCATTTATATGTACATAAACTCCACGGGGACATTCAAGGGAGATCGTAAGTTGGGTTATGAGACTGAAGCACTTGCAGTTTATGATTTGATGAGGCATATGAGGACTCCTATTTTTACTCTCTGTGTTGGCAATGCTTGGGGAGAGGCGGCCTTACTTTTGGCTGCTGGTTCAAAGGGTAATCGTTCTGCCTTGCCATCATCAACAATAATGATAAGAGAGCCAATTGCACAGTTTCAAGGTCAAGCATCAGATGTCTGGCTTGCAAAAAGAGAAATCACTAGAGTGAAGACAGCATTGGTTGATTTGTTAGCAATGCACACTGAAAAAACACCTGAGCAGATTGTAGCTGATACTCGGCGTCCAAAATACTTTAGTCCTACTGAAGCTGTTGAGTATGGAATCATAGACAAGGTGATTTACAATGAGAAGGGCTCTAAGGATCGTGGCGTTGTTTCTGACCTTCAAAAGGCATAG 906 0.4426 MEVATANAAFTFAVNKPLFVSPSSSRTTSSIRPIKSSFRNSISTDFVAPSTAITSSSSSHFSGHKLRPPCLNPASFRTSGGKRGVVTMVIPFKRGNAREQPPPDLASYLFKNRIIYLGMPLIPSVTELMIAEFLYLQNDDPTKPIYMYINSTGTFKGDRKLGYETEALAVYDLMRHMRTPIFTLCVGNAWGEAALLLAAGSKGNRSALPSSTIMIREPIAQFQGQASDVWLAKREITRVKTALVDLLAMHTEKTPEQIVADTRRPKYFSPTEAVEYGIIDKVIYNEKGSKDRGVVSDLQKA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2570 301 CDD S14_ClpP_2 104 282 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr5g2570 301 Gene3D - 76 291 - -
Tpr5g2570 301 Pfam Clp protease 104 285 IPR023562 -
Tpr5g2570 301 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 14 301 - -
Tpr5g2570 301 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 14 301 IPR023562 -
Tpr5g2570 301 PRINTS Clp protease catalytic subunit P signature 104 119 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr5g2570 301 PRINTS Clp protease catalytic subunit P signature 144 164 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr5g2570 301 PRINTS Clp protease catalytic subunit P signature 183 200 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr5g2570 301 PRINTS Clp protease catalytic subunit P signature 204 223 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr5g2570 301 PRINTS Clp protease catalytic subunit P signature 261 280 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr5g2570 301 SUPERFAMILY ClpP/crotonase 98 286 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2570 Tpr-Chr5 47705231 47712244 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2570 K01358 - gmx:100780029 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2570 5 47705231 47712244 Tpr5g2570 5 47705231 47712244 ECH