Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2565 ATGGATCAGTTGTCGGCGATCAGCGAGGATCTGGCGGAGATCGACGGACGCGTCGCCGACAATTTCCGCGCTCTATCAAATGGATTTCAGAAGCTGGAGAAGATTAAGGATTCGAGTAGACAGAGCCGGCAATTGGAAGATCTCACGGAGAAAATGCGAGAGGCTAAAGGGCTTATTAAAGATTTCGATAAAGAAGTCAAAGCCTTGGAGGATCGTTTTGACAGTAAAACTACCAAATTTTTGAATGAGAAAAAGCAGTCAATGATCAAAGAGTTGAATTCATATGTTGCTTTGAAGAAACAATATGCTTCAAATATTGAGAATAAGCGAATTGAACTCTTTGAGGGACCCAGTGAAGGTTACACAGAAGAAAATGTCTTGCTAGCTTCCTCAATGACAAATGAACAGCTAATGGATCAAGGGAATCGGATGATGGATGACACAGATCAAGCCATTGAAAGGGGGAAAAGGATTGTTCAAGACACAATAAATGTTGGTACTGAGACTGCAGCAGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAGTTGTCAATGAGCTAGATTCTATCCATTTCTCTATAAAGAAAGCATCTAAACTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGACATTACTTTTCCTTATCGTCATTGGAGTAATTGCTATCATTATTGTGAAGCTTGTGCATCCAGAAAACAAGGACATTCGCGACATTCCAGGATTAGCTCCTCCGGTCATGAACAATAGAAGATTGCTTTGGAATCACAGTTGA 789 0.4132 MDQLSAISEDLAEIDGRVADNFRALSNGFQKLEKIKDSSRQSRQLEDLTEKMREAKGLIKDFDKEVKALEDRFDSKTTKFLNEKKQSMIKELNSYVALKKQYASNIENKRIELFEGPSEGYTEENVLLASSMTNEQLMDQGNRMMDDTDQAIERGKRIVQDTINVGTETAAALKAQTEQMSRVVNELDSIHFSIKKASKLVKEIGRQVATDKCIMTLLFLIVIGVIAIIIVKLVHPENKDIRDIPGLAPPVMNNRRLLWNHS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2565 262 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Tpr5g2565 262 Gene3D - 133 212 - -
Tpr5g2565 262 PANTHER NOVEL PLANT SNARE 11 1 250 - -
Tpr5g2565 262 SMART tSNARE_6 137 204 IPR000727 -
Tpr5g2565 262 Coils Coil 38 79 - -
Tpr5g2565 262 SUPERFAMILY SNARE fusion complex 132 205 - -
Tpr5g2565 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Tpr5g2565 262 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 250 - -
Tpr5g2565 262 Pfam Sec20 150 232 IPR005606 GO:0005484|GO:0006890
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2565 Tpr-Chr5 47684692 47689188 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2565 K08494 - gmx:100786429 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2565 5 47684692 47689188 Tpr5g2565 5 47684692 47689188 ECH