Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2537 ATGAGCACCACTACTCTACCTTCTGTTCCACCACAAGATGCATGGACTCTCACTTCTCACAACTACCTCTCTCGTTGGGATTCCCTCTCTCACCAGTCAACTATCCCAATTTCAATATCTAGAGTTAACCAAGTTGATGCTGCAAGATTGGACATTGAAATGTCAGCCATGTTGAAAGAACAGTTGGTTAAAGTCTTCACTTTGATGAAGCCAGGAATGTTATTTCAATATGAAGCAGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGAGATTCTCAATTTGGGTGGATAAGCCAACTCCCGGTATTGCTCTCATGAATTTGAGGTATAGAGATGAGCGTGCAGTTGAAGCAAGAGAAAAAGTAAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCTCAGAAGCTTTGGTATTGTATTGCCACTGTTGGTGGTCAGTATATTTGGGCTCGCTTACAATCGTTCTCTGCATTTCGTAGGTGGGGTGATACTGAGCAGAGACCATTGGCACGGCGTTTATGGATCTTCATACAAAGAATAGAAGGGATTTATAGAGCTGCTTCATTTGGAAACCTATTGATATTTCTTTGCACGGGAAGATATCGAAATCTTATTGAAAGAGTCTTACGAGCTAGGCTTGTATATGGGAGCCCAAATATGAACCGTGCTGTTAGCTTCGAGTATATGAACCGACAATTAGTTTGGAATGAATTCTCGGAAATGTTATTGTTGCTTCTTCCTCTTCTTAATTCGTCGTCTGTAAAGAATCTCCTCCGACCTTTTTCTAAGGATAAATCATCAAGTTCGGATGAGGATACCACTGCATGTCCTATTTGTCAGGCTACTCCAATCATTCCTTTTGTTGCTTTACCTTGTCAGCACAGATATTGTTACTACTGTCTTCGGACACGGTGTGCTGCTGCCCCTTCATTTAGGTGTTCGAGGTGCAGTGAGCCAGTTGTTGCCATGCAACGACATGGTGGTGTTGCCACGGGATGA 1002 0.4291 MSTTTLPSVPPQDAWTLTSHNYLSRWDSLSHQSTIPISISRVNQVDAARLDIEMSAMLKEQLVKVFTLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEAREKVRTGLEGPGLTVAQKLWYCIATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWIFIQRIEGIYRAASFGNLLIFLCTGRYRNLIERVLRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSSSDEDTTACPICQATPIIPFVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHGGVATG* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2537 333 ProSiteProfiles Zinc finger RING-type profile. 277 318 IPR001841 -
Tpr5g2537 333 Coils Coil 331 333 - -
Tpr5g2537 333 SUPERFAMILY RING/U-box 272 323 - -
Tpr5g2537 333 CDD RING-HC_PEX2 276 318 - -
Tpr5g2537 333 PANTHER - 2 330 - -
Tpr5g2537 333 Pfam Zinc finger, C3HC4 type (RING finger) 277 317 IPR018957 GO:0046872
Tpr5g2537 333 Pfam Pex2 / Pex12 amino terminal region 53 255 IPR006845 -
Tpr5g2537 333 ProSitePatterns Zinc finger RING-type signature. 293 302 IPR017907 -
Tpr5g2537 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 330 IPR013083 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2537 K06664 - gmx:100805856 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2537 5 47342151 47345738 Tpr5g2537 5 47342151 47345738 ECH