Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2533 ATGGAAACGAGTAGAAGAGCGGTGGAATCGTACTGGAGGTCAAGGTTAATCGATTCAGCTACATCAGATGAAGATAAAGTTACACCTGTTTACAAATTGGAAGAAATTTGTGAGCTTTTGCGTTCTTCACATGTTTCTATTGTTAAGGAAGTTTCAGATTTTGTTTTGAAACGTTTGGATCATAAGAGTCCCATTGTAAAACAGAAGGCTTTAAGATTGATAAAATATGCAGTTGGAAAGTCTGGTGCTGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCAATTCGTCAATTATTGCACTACAAGGGACAGTTGGATCCTTTGAAAGGCGATGCACTAAATAAGGCGGTACGGGACACTGCTCAGGAGGCTGTCTCTGCCATCTTCTCAGAAGATAATAGTAATAGTAATATTAAGGTTGCCGCACCTTCTCAAGATCTTAACAGGCGGATACAAGGGTTTGGGAATACAAACTATGAACCGCCATCTGAAGATAAGAAGTCTTTTATTAGTGAGGTAGTTGGTATTGGAAGTGCATCAATTAAGCAAGGAATTCATAGCTTAACACAAGGACATTCACTAATGAAGAATGAAACTGGAAGTGGAAGCTACAAGAGTCCAAATCTTCAAAGGTCGCTGACCAACGAATCAGAACATGGTGACAGATATGTACCAGTTGCGTATCGTAGTGAAACTCAGAGTAGTTTTGGACTTCCAAAGAATCAATCTAGTGGTTCTTGGAATCAGGATTCTAGAGTAACTAAGATGGACATTTCAAATGGCGAATCCAGTGGAAATTCTTCAGAGACTAAGACTAGAGAGGATAGGCTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGTCTACAACCCTCTCGAGATGCCATTCAAGCTTTTCTAACAGAGGCTGCAAAGTTGGATGCCCTAGCTTTAAGTCATGCTCTTGAATTAAAGCTACAATCTCCTATTTGGCAGGTGCGCATGAAAGCTGTTTGTGTTCTTGAGTCCGTCCTCAGAAAGAAGGGTGATGAACATTTTTCGTATGTGGCATCTTACTTCACTGAACATAATGACGCCGTGCAGAAATGTTCCGAATCTCCCCAAGCCTCTTTGAGGGAAAAGGCTATAAAGGTTCTTGGTCTTCTAGGTGGAGGCCAGCCAAACAGTTCTGCTATTAGTTCAGAGAAAGCTGTAAAGACAGAGCGTCCTGTTGTTGCTGAATTGCCTGACTTGATAGACACTGGCGATTCAAATGATAACACAGCCAATACTACAAATGAACAAAGTATAGGAAATTTGACATCATCCGCACCTCTGGTTGATGATTTATTTGGCGATATAAGCGGCTCTATTGGAGCTAGTCATGAAGTGAAAAATGACGACGACCCATTTGCGGATGTATCATTTCACTCGGGCGAGAGCAAAGAACAAGCAGATGATCTATTTTCAGGAATGACAGTTGGCGTTGATAAGCCAGTTGATCAATGGAGTCACAAGCAGGGGATTCAAAGTGATCCTCAACTTTTTGACGTTTTTGCTTCTGGTTCGGAGCAAGGAAATCATAACGCGTCTTTTGGTGATTTAATGGGTGGTTTATCAATAGATGAAAATACCTCAAGCACGGCGAAGCAGAAGGGAACATATTCTGCAGTGCAATCTGAATCTTTATTTTCAGGTTTAAACAACCACACCCCAGAGAATACTCTGGGCGGCATGTTGGGATCTCAGGCTCAGCCAGTTGGGTTCAATGGAAACCCGTTGTTTCCCACTGGTCATCTGCCTTATAATATGCAACCTGGTATTATGTTGAACCAGCCATATCCTTCTCAGCCTCTTAATTATGGTGCCATGGGAACTCTCTTAGCTCAGCAACAATTACTCGCTACAATGGCTAATTTCCAACACCTTAGTAATGTCAACATGCGAGATGATGGTGTTGCTCAAATGGTTGGACCTAATGGAAATTCACCTTTGCCAGACATATTTCAACCAAATTTTGCATCTCAAACTCCCAGCTCAATGATCAATAATTCAAAGAAAGAAGATAACACAAAAGCATTTGATTTTATCTCGGACCATCTTAGCTCTGCTCGTGATTCAAGGAGAGTGATTTGA 2118 0.4155 METSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEICELLRSSHVSIVKEVSDFVLKRLDHKSPIVKQKALRLIKYAVGKSGAEFRREMQRHSVAIRQLLHYKGQLDPLKGDALNKAVRDTAQEAVSAIFSEDNSNSNIKVAAPSQDLNRRIQGFGNTNYEPPSEDKKSFISEVVGIGSASIKQGIHSLTQGHSLMKNETGSGSYKSPNLQRSLTNESEHGDRYVPVAYRSETQSSFGLPKNQSSGSWNQDSRVTKMDISNGESSGNSSETKTREDRLLETIVTSGGVRLQPSRDAIQAFLTEAAKLDALALSHALELKLQSPIWQVRMKAVCVLESVLRKKGDEHFSYVASYFTEHNDAVQKCSESPQASLREKAIKVLGLLGGGQPNSSAISSEKAVKTERPVVAELPDLIDTGDSNDNTANTTNEQSIGNLTSSAPLVDDLFGDISGSIGASHEVKNDDDPFADVSFHSGESKEQADDLFSGMTVGVDKPVDQWSHKQGIQSDPQLFDVFASGSEQGNHNASFGDLMGGLSIDENTSSTAKQKGTYSAVQSESLFSGLNNHTPENTLGGMLGSQAQPVGFNGNPLFPTGHLPYNMQPGIMLNQPYPSQPLNYGAMGTLLAQQQLLATMANFQHLSNVNMRDDGVAQMVGPNGNSPLPDIFQPNFASQTPSSMINNSKKEDNTKAFDFISDHLSSARDSRRVI* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2533 705 PANTHER UNCHARACTERIZED 1 698 IPR039273 -
Tpr5g2533 705 Pfam ENTH domain 16 128 IPR013809 -
Tpr5g2533 705 MobiDBLite consensus disorder prediction 235 268 - -
Tpr5g2533 705 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Tpr5g2533 705 Gene3D - 2 139 IPR008942 -
Tpr5g2533 705 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Tpr5g2533 705 MobiDBLite consensus disorder prediction 235 275 - -
Tpr5g2533 705 MobiDBLite consensus disorder prediction 197 215 - -
Tpr5g2533 705 SUPERFAMILY ARM repeat 36 386 IPR016024 -
Tpr5g2533 705 SMART VHS_2 13 152 IPR002014 GO:0035091|GO:0043130
Tpr5g2533 705 MobiDBLite consensus disorder prediction 197 221 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2533 - - gmx:100803368 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2533 5 47313220 47319633 Tpr5g2533 5 47313220 47319633 ECH