Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2509 ATGGCAAATGAGCAGAAAACAGCTGCTTTAGAGGGAGCCGCTGAGAGAGCCAGTCGGCGCCGGAGAACCGAGGTGATGCAGCTGATTCTTAGGGCTTTGTGCATTGGAAGCTCTATTGTTTCTTTGTCACTAATGATCACTGCCAAACAAAACAAATCAGTTCGTATCTTTGGCGGCATTCACTATCCTGTTCATGCCAAATGGTCTTTCTCTCAATCTTTCATATTTCTTGTTGGAGTTTCTGTGGCCGTTGCAGCTTATTCCTTGCTGCAACTACTTATTGGGCTGTCAAGATTTTTTAGGTCATCTTCTTTGATTTCTTCTAGAAATCACGCATGGCTTATTTTTGCTGCGGATCAGGCATTTGCTTATGCATTGATGAGTGCAGGATCAGCTGCATCTGGAGTAACAAGTCTGAATCACACAGGAATTAAACTTACACCTCTTCCAAATTTTTGTAAACCTTTGCAAAAATTTTGTGACCATGTTGCCATCTCAATAGTCTTCAATTTCATCAATTGTTTTTTGCTTGCTACACTTGCTATCCATCATGTAATATGGCTCTCCCAACATTGA 576 0.4132 MANEQKTAALEGAAERASRRRRTEVMQLILRALCIGSSIVSLSLMITAKQNKSVRIFGGIHYPVHAKWSFSQSFIFLVGVSVAVAAYSLLQLLIGLSRFFRSSSLISSRNHAWLIFAADQAFAYALMSAGSAASGVTSLNHTGIKLTPLPNFCKPLQKFCDHVAISIVFNFINCFLLATLAIHHVIWLSQH* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2509 191 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 8 190 - -
Tpr5g2509 191 Pfam Casparian strip membrane protein domain 21 175 IPR006702 -
Tpr5g2509 191 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 28 185 IPR006459 -
Tpr5g2509 191 PANTHER CASP-LIKE PROTEIN 3A2 8 190 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2509 6 191 Miscellaneous Gene Families AT3G16300 45.161 2.49e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2509 - - gmx:100783028 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2509 5 46915100 46917398 Tpr5g2509 5 46915100 46917398 ECH