Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2505 ATGATTATGGCACCTCATGGAGAATCTTTGCTATCAACTTCATTAATCTCAAGGAGCAACAACAAATCAACAAAGCTCTCAAATTCCGACCACCTTCAAAGAACGATTTCGGACATTTCCTTCGAATTGACAAAAGAAATTGATAATTTAAACCTACCATCGATATCCGAAGTTGAAGATGCAAAGTGTGAGTGTTGTGGTATGTCCGAGGAGTGTACACCCGAGTACATAGAACGAATTCGCAACAAATTCGAAGGGAAGTTTGTGTGCGGATTGTGTTCTGAGGCGGTGAAGGAAGAGTTGGTTAAAAATGGTGGGGAAAAATTGGATGAAGCTTTAAGTACACATATGAATGCTTGTGCTAGGTTTAACAAATATGGTAGGGCTTTTCCTGTTTTGTTTCAAGCTCAAGCTATGAAAGAGATGCTAAAAAAGAGTAACTTAGATAGGGCTAAGTCAATTAGTCCAAGGGACAAGAGAGGAGGAGGAGGGCTAGCTCGTAGTTCAAGTTGTATTCCAGCACTTACAAGAGAGATCAACAATATCAAAATAGCAAATTAA 561 0.3922 MIMAPHGESLLSTSLISRSNNKSTKLSNSDHLQRTISDISFELTKEIDNLNLPSISEVEDAKCECCGMSEECTPEYIERIRNKFEGKFVCGLCSEAVKEELVKNGGEKLDEALSTHMNACARFNKYGRAFPVLFQAQAMKEMLKKSNLDRAKSISPRDKRGGGGLARSSSCIPALTREINNIKIAN* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2505 186 PANTHER CASP-LIKE PROTEIN (DUF1677) 11 183 - -
Tpr5g2505 186 MobiDBLite consensus disorder prediction 147 168 - -
Tpr5g2505 186 Pfam Protein of unknown function (DUF1677) 58 145 IPR012876 -
Tpr5g2505 186 PANTHER OS01G0745000 PROTEIN 11 183 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2505 Tpr-Chr5 46859480 46860480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2505 - - gmx:100816162 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2505 5 46859480 46860480 Tpr5g2505 5 46859480 46860480 ECH
Tpr7g4889 7 56847756 56848950 Tpr5g2505 5 46859480 46860480 PCT