Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2500 ATGAAAGATTTAACTTCAAACCAATCTCCATGCTCTAAGCTCTCTATGGACGAGATACTTGAATTGGAACGAATATACAATGACGTGGGAGAAAAATCACTTGATCACAATTTCTGCAAGGATATTGCTACAAATTTTAGCTCTTCATCAAACAGTGTTGGTAAAAATTCTTTATCATGGGAACAGGTGCAGCAGTGGTTCCAAAATAAACATAGAGAGTCAAAGGGTCAGTTTGCTTCATCACCTGAGGGGCTGAACCTATTTGTTGATCTTTCGGAAAAATCTTCCATAAAGGGACATAAAAGCTCTCCGAAACCAAAAGGTATTCAAGCTGCAGATCTGTCGGAAATGGCATTTGAAGCAATATCTATAAAAGACAATGCATGGCACGACGTTGCAATGTTTATGAACTATAGAGTGCTGTGCACAGGCGAACTTGAAGTTCGTGTACGCTATCATGGATTCAGTAAGGATGAAGATGAATGGATTAACGTGAAAGATGGGGTGCGGCAAAGATCCATCCCATTGGAAGCTTCGGAGTGTCACAAGGTGCAGGAAGGACATCTTGTACTATGTTTCTTGGAAAAATCTGATTATGCCCTTTATTGTGATGCTTGTGTTTTAAAAATCGAGAGGAGGGTACATGATAGCAAAGAGTGTAGCTGCATCTTCACTGTCCGGTTTTACCATGACAAGTCTGAGGAAGAAGTTCGTTGGGACGGTATATGCTGTAGGCCAACACAAGAAGAAGCTGAGGCCCCCTTAGAAGCTTTCCTGAACCCCATAGAGACCTTGTGGGGATAG 804 0.4167 MKDLTSNQSPCSKLSMDEILELERIYNDVGEKSLDHNFCKDIATNFSSSSNSVGKNSLSWEQVQQWFQNKHRESKGQFASSPEGLNLFVDLSEKSSIKGHKSSPKPKGIQAADLSEMAFEAISIKDNAWHDVAMFMNYRVLCTGELEVRVRYHGFSKDEDEWINVKDGVRQRSIPLEASECHKVQEGHLVLCFLEKSDYALYCDACVLKIERRVHDSKECSCIFTVRFYHDKSEEEVRWDGICCRPTQEEAEAPLEAFLNPIETLWG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2500 267 Gene3D - 114 175 - -
Tpr5g2500 267 SUPERFAMILY Homeodomain-like 18 78 IPR009057 -
Tpr5g2500 267 Pfam SAWADEE domain 116 243 IPR032001 GO:0003682
Tpr5g2500 267 Gene3D - 176 248 - -
Tpr5g2500 267 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 1 249 - -
Tpr5g2500 267 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 249 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2500 Tpr-Chr5 46773407 46777956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2500 - - gmx:100799110 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2500 5 46773407 46777956 Tpr5g2500 5 46773407 46777956 ECH