Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2493 ATGCGATCATTAACATTAACGCCGCAAACAATGCCGGAAACCTCCGTCAATTTCCGTGCACCACCTCCATCTCCGGTTGCTTCTGGTCGTAGATCAACCGTAACAAACAACGAATTTCTAACAGAGTTTTTAGAAACCTCACTTCGAGTTCCAGATCTAGTTTTACCTGACAAGATTTTTCCTAAACAGATCCATCACGAAACTCCACCGAAAGTCGATTTCGTTTCGTTGTGTTTTCACAAAGATGAAGATTTAATCGACGTTGTTTCGGAGTCCATAGCTAGATTCGGATGCTTTCAACTTCTCAATCACGGGATTTCGCAGCAACTAATGGCTGCTGCAGTTGAGGCTGCCGGAGGAATATTTTTGGTGCTGCCGGGAAAGAGAGACGCCGTGACGCGGTCGCCGGAGAAACTTTGGGGTTTTGAAGAGTATCGTGAAGGAGAAGAGGAGAGAAGTGAATTGAATGAAGAATTTATTTGGCGCAAGGATGAAGAGTTGAAGTTGAAAATGGAGGGAATTTGGCCTATTGGATATCCTAATTTTAGCAAGAAGATGGAAACTTTACACTCACGTGTGGAGAAGGTGGCAGACAAAATTTTGCCTATCATATTGAAAAATGCTCCTAAGAAATTAACAAGTAATGGTGATATAATTGGTCATGGAAATGAAGTTGGGACACTATGTTGCATTTACAAACATCGCCAAGATATTAATAGGAATAATCAATGGGTTGATTCTTTGAAATATGATGTGATTAGAATGCTGATTAGGGGAACTGATTACTCACATTCTTTGTGTTTGCATGTGTGTGATGGCTCTTCAGAGTTTCATGTTTACTCCAAGAAAAGTTGGCTGTCTTTCTGTCCTGAACAAGGTGCCCTTGTAATCACTGCTGGAGATCAAATACAGGTATTGAGTGGTGGGCACTACAAGGATGTAATTGGAAAGGCAATCTTTAAAGGTGAAAGAGAAGACAATATTTCAATGGCTTTCCTCTATTCTCCTCAAAACACCAAGAGAAAAATTCAAACCAATACAGAAAGACCTATTTCACTTAGCCAACAAGCCATCTTGGCTGTAATTTTGAACCTTATGTACCATGTCCTAATTTTTGTCTTGAAAAAAGTTTGA 1134 0.4012 MRSLTLTPQTMPETSVNFRAPPPSPVASGRRSTVTNNEFLTEFLETSLRVPDLVLPDKIFPKQIHHETPPKVDFVSLCFHKDEDLIDVVSESIARFGCFQLLNHGISQQLMAAAVEAAGGIFLVLPGKRDAVTRSPEKLWGFEEYREGEEERSELNEEFIWRKDEELKLKMEGIWPIGYPNFSKKMETLHSRVEKVADKILPIILKNAPKKLTSNGDIIGHGNEVGTLCCIYKHRQDINRNNQWVDSLKYDVIRMLIRGTDYSHSLCLHVCDGSSEFHVYSKKSWLSFCPEQGALVITAGDQIQVLSGGHYKDVIGKAIFKGEREDNISMAFLYSPQNTKRKIQTNTERPISLSQQAILAVILNLMYHVLIFVLKKV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2493 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 377 - -
Tpr5g2493 377 Gene3D - 68 354 IPR027443 -
Tpr5g2493 377 SUPERFAMILY Clavaminate synthase-like 58 343 - -
Tpr5g2493 377 PANTHER - 13 377 - -
Tpr5g2493 377 MobiDBLite consensus disorder prediction 1 32 - -
Tpr5g2493 377 MobiDBLite consensus disorder prediction 1 17 - -
Tpr5g2493 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 71 164 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2493 Tpr-Chr5 46644467 46647610 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2493 - - aprc:113851004 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2493 5 46644467 46647610 Tpr5g2493 5 46644467 46647610 ECH